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  5. XM_002505536.1

XM_002505536.1 (MICPUN_98268, 98268)


Aliases : MICPUN_98268, 98268

Description : Rvb2-like protein


Gene families : OG_01_0000819 (OrthoFinder) Phylogenetic Tree(s): OG0000819_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002505536.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000836.8 tig00000836_g4692.t1 Chromatin organisation.chromatin remodeling... 0.05 OrthoFinder
Cre09.g414050 30781252 Chromatin organisation.chromatin remodeling... 0.04 OrthoFinder
Cre10.g442700 30789854 Chromatin organisation.chromatin remodeling... 0.07 OrthoFinder
Cz06g35240.t1 No alias TIP49, P-loop domain; RuvB-like, AAA-lid domain [Interproscan]. 0.02 OrthoFinder
Dusal.0576s00001.1 33196155 TIP49, P-loop domain; RuvB-like, AAA-lid domain [Interproscan]. 0.02 OrthoFinder
PTI_04G05980.1 No alias TIP49, P-loop domain; RuvB-like, AAA-lid domain [Interproscan]. 0.01 OrthoFinder
Sro139_g065070.1 Contig4334.g32683 RuvB-like helicase 1 0.02 OrthoFinder
Sro2292_g322230.1 Contig4369.g32900 RuvB-like helicase 2 0.01 OrthoFinder
SymbC1.scaffold3396.5 3396.5 RuvB-like, AAA-lid domain [Interproscan]. 0.02 OrthoFinder
Vocar.0001s1219.1 32885488 RuvB-like, AAA-lid domain; TIP49, P-loop domain [Interproscan]. 0.02 OrthoFinder
Vocar.0046s0033.1 32892982 RuvB-like, AAA-lid domain; TIP49, P-loop domain [Interproscan]. 0.03 OrthoFinder
XM_003060424.1 MicpuC2_19130, 19130 Rvb1-like protein 0.03 OrthoFinder
XM_003063649.1 MicpuC2_44976, 44976 TIP49, P-loop domain; RuvB-like, AAA-lid domain [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01000249.1_cds_GFH09635.1_4112 HaLaN_04814, GFH09635 RuvB-like helicase 0.02 OrthoFinder
lcl|BLLF01000815.1_cds_GFH15176.1_9653 HaLaN_11355, GFH15176 RuvB-like helicase 0.01 OrthoFinder
lcl|BLLF01000815.1_cds_GFH15177.1_9654 HaLaN_11356, GFH15177 RuvB-like helicase 0.02 OrthoFinder
lcl|BLLF01004324.1_cds_GFH29390.1_23867 HaLaN_28037, GFH29390 RuvB-like helicase 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498499.1_7452 KAA8498499 RuvB-like 1 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP Enrichment
CC GO:0000502 proteasome complex IEP Enrichment
BP GO:0003352 regulation of cilium movement IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
BP GO:0009894 regulation of catabolic process IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0019107 myristoyltransferase activity IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
MF GO:0019905 syntaxin binding IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
BP GO:0032879 regulation of localization IEP Enrichment
BP GO:0032886 regulation of microtubule-based process IEP Enrichment
BP GO:0042176 regulation of protein catabolic process IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0051270 regulation of cellular component movement IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0060632 regulation of microtubule-based movement IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR010339 TIP49_P-loop 21 365
IPR041048 RuvB-like_C 371 436
No external refs found!