XM_002505455.1 (MICPUN_103799, 103799)

Aliases : MICPUN_103799, 103799

Description : ATP-binding cassette superfamily

Gene families : OG_01_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: XM_002505455.1
Cluster	HCCA: Cluster_39

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00021537.71	tig00021537_g22322.t1	ABC transporter G family member 27 OS=Arabidopsis thaliana	0.02	OrthoFinder
Cre02.g096000	30785390	Solute transport.primary active transport.ABC...	0.04	OrthoFinder
Cre04.g220850	30791308	ABC transporter G family member 11 OS=Arabidopsis thaliana	0.01	OrthoFinder
Cz02g27230.t1	No alias	ABC-2 type transporter; ABC transporter-like [Interproscan].	0.02	OrthoFinder
Cz03g22070.t1	No alias	ABC-2 type transporter; ABC transporter-like [Interproscan].	0.01	OrthoFinder
Cz12g02110.t1	No alias	ABC-2 type transporter; ABC transporter-like [Interproscan].	0.01	OrthoFinder
Cz14g16020.t1	No alias	ABC-2 type transporter; ABC transporter-like [Interproscan].	0.01	OrthoFinder
OT_04G00620.1	No alias	ABC-2 type transporter; ABC transporter-like [Interproscan].	0.02	OrthoFinder
lcl\|LHPG02000026.1_cds_PRW18394.1_5839	PRW18394	ABC transporter G family member 7	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0051536	iron-sulfur cluster binding	IEP	Enrichment
MF	GO:0051540	metal cluster binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	85	237
IPR013525	ABC_2_trans	391	600

External Links

No external refs found!