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  5. XM_002505367.1

XM_002505367.1 (MICPUN_63428, 63428)


Aliases : MICPUN_63428, 63428

Description : Serine hydroxymethyltransferase-like domain [Interproscan].


Gene families : OG_01_0000330 (OrthoFinder) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002505367.1
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
OT_14G02690.1 No alias Serine hydroxymethyltransferase-like domain [Interproscan]. 0.05 OrthoFinder
PTI_03G04180.1 No alias Serine hydroxymethyltransferase-like domain [Interproscan]. 0.02 OrthoFinder
Sro30_g019890.1 Contig3962.g30389 Serine hydroxymethyltransferase 0.01 OrthoFinder
TP18G01090.1 No alias Serine hydroxymethyltransferase-like domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_56285 56285 Serine hydroxymethyltransferase-like domain [Interproscan]. 0.01 OrthoFinder
Vocar.0041s0018.1 32888726 Serine hydroxymethyltransferase-like domain [Interproscan]. 0.01 OrthoFinder
XM_003059639.1 MicpuC2_49634, 49634 Serine hydroxymethyltransferase-like domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61055.1_24 PRW61055 Serine hydroxymethyltransferase 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004618 phosphoglycerate kinase activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016151 nickel cation binding IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0016851 magnesium chelatase activity IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0019627 urea metabolic process IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043419 urea catabolic process IEP Enrichment
BP GO:0043605 cellular amide catabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Enrichment
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Enrichment
BP GO:0071941 nitrogen cycle metabolic process IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 27 425
No external refs found!