1. Home
  2. Species
  3. Micromonas commoda
  4. Sequence
  5. XM_002505136.1

XM_002505136.1 (MICPUN_62427, 62427)


Aliases : MICPUN_62427, 62427

Description : Nuclear pore localisation protein NPL4, C-terminal; Nuclear pore localisation protein Npl4, ubiquitin-like domain [Interproscan].


Gene families : OG_01_0003902 (OrthoFinder) Phylogenetic Tree(s): OG0003902_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002505136.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Cz11g28150.t1 No alias Nuclear pore localisation protein Npl4, ubiquitin-like... 0.05 OrthoFinder
Dusal.0617s00001.1 33190787 Nuclear pore localisation protein NPL4, C-terminal;... 0.02 OrthoFinder
PTI_03G03730.1 No alias Nuclear pore localisation protein NPL4, C-terminal... 0.03 OrthoFinder
Sro295_g110450.1 Contig4342.g32768 NPL4-like protein 2 0.02 OrthoFinder
TP02G03740.1 No alias Nuclear pore localisation protein NPL4, C-terminal... 0.08 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR024682 Npl4_Ub-like_dom 1 84
IPR007717 NPL4_C 158 296
No external refs found!