1. Home
  2. Species
  3. Micromonas commoda
  4. Sequence
  5. XM_002505028.1

XM_002505028.1 (MICPUN_62813, 62813)


Aliases : MICPUN_62813, 62813

Description : Ribosomal protein L9, C-terminal; Ribosomal protein L9, N-terminal [Interproscan].


Gene families : OG_01_0003503 (OrthoFinder) Phylogenetic Tree(s): OG0003503_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002505028.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000169.8 tig00000169_g11880.t1 No description available 0.02 OrthoFinder
Cre12.g556050 30792151, PRPL9 Protein biosynthesis.organelle translation... 0.23 OrthoFinder
Cz09g09260.t1 No alias Ribosomal protein L9, N-terminal; Ribosomal protein L9,... 0.22 OrthoFinder
OT_02G04410.1 No alias Ribosomal protein L9, C-terminal; Ribosomal protein L9,... 0.27 OrthoFinder
SymbC1.scaffold9245.1 9245.1 Ribosomal protein L9, C-terminal; Ribosomal protein L9,... 0.04 OrthoFinder
Vocar.0001s1112.1 32884313 Ribosomal protein L9, N-terminal; Ribosomal protein L9,... 0.05 OrthoFinder
XM_003060194.1 MicpuC2_59815, 59815 Ribosomal protein L9, C-terminal; Ribosomal protein L9,... 0.12 OrthoFinder
lcl|BLLF01000410.1_cds_GFH11513.1_5990 HaLaN_07021, GFH11513 Ribosomal_L9 domain-containing protein 0.07 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59565.1_6605 PRW59565 50S ribosomal L9 0.12 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004325 ferrochelatase activity IEP Enrichment
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP Enrichment
BP GO:0006783 heme biosynthetic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015252 proton channel activity IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
BP GO:0034311 diol metabolic process IEP Enrichment
BP GO:0034312 diol biosynthetic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
BP GO:0046146 tetrahydrobiopterin metabolic process IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR020069 Ribosomal_L9_C 113 194
IPR020070 Ribosomal_L9_N 51 94
No external refs found!