Aliases : MICPUN_86520, 86520
Description : Pre-rRNA-processing protein TSR2 [Interproscan].
Gene families : OG_01_0000274 (OrthoFinder) Phylogenetic Tree(s): OG0000274_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: XM_002505010.1 | |
Cluster | HCCA: Cluster_24 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre10.g426250 | 30790570 | No description available | 0.05 | OrthoFinder | |
OT_15G01960.1 | No alias | Pre-rRNA-processing protein TSR2 [Interproscan]. | 0.03 | OrthoFinder | |
Sro1123_g243640.1 | Contig3394.g26538 | Processing protein TSR2 homolog | 0.03 | OrthoFinder | |
XM_003058443.1 | MicpuC2_68172, 68172 | Hypothetical protein | 0.03 | OrthoFinder | |
XM_003060247.1 | MicpuC2_68910, 68910 | Hypothetical protein | 0.04 | OrthoFinder | |
XM_003060743.1 | MicpuC2_60352, 60352 | Hypothetical protein | 0.02 | OrthoFinder | |
XM_003062006.1 | MicpuC2_51904, 51904 | Hypothetical protein | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Enrichment |
CC | GO:0005730 | nucleolus | IEP | Enrichment |
CC | GO:0005737 | cytoplasm | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Enrichment |
BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
MF | GO:0097747 | RNA polymerase activity | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR019398 | Pre-rRNA_process_TSR2 | 9 | 88 |
No external refs found! |