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  5. XM_002504940.1

XM_002504940.1 (MICPUN_95488, 95488)


Aliases : MICPUN_95488, 95488

Description : Type II secretory pathway family (SEC61a)


Gene families : OG_01_0002411 (OrthoFinder) Phylogenetic Tree(s): OG0002411_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002504940.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000836.9 tig00000836_g4693.t1 Protein translocation.endoplasmic... 0.01 OrthoFinder
Cz01g29020.t1 No alias Translocon Sec61/SecY, plug domain; SecY/SEC61-alpha... 0.04 OrthoFinder
EOD26277 No alias Translocon Sec61/SecY, plug domain; SecY/SEC61-alpha... 0.02 OrthoFinder
OT_15G02140.1 No alias SecY/SEC61-alpha family; Translocon Sec61/SecY, plug... 0.03 OrthoFinder
PTI_27G00750.1 No alias SecY/SEC61-alpha family; Translocon Sec61/SecY, plug... 0.06 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61345.1_350 PRW61345 Transport Sec61 subunit alpha-like 0.03 OrthoFinder
lcl|VRMN01000007.1_cds_KAA8493234.1_9535 KAA8493234 Protein transport protein Sec61 subunit alpha 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030118 clathrin coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030125 clathrin vesicle coat IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Enrichment
CC GO:0030132 clathrin coat of coated pit IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR019561 Translocon_Sec61/SecY_plug_dom 42 76
IPR002208 SecY/SEC61-alpha 77 458
No external refs found!