XM_002504900.1 (MICPUN_62560, 62560)


Aliases : MICPUN_62560, 62560

Description : Regulator of chromosome condensation, RCC1 [Interproscan].


Gene families : OG_01_0000020 (OrthoFinder) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002504900.1
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Cre01.g025900 30789384 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.02 OrthoFinder
EOD04412 No alias Regulator of chromosome condensation (RCC1) repeat;... 0.02 OrthoFinder
Transcript_contig_2579 2579 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
Transcript_contig_58480 58480 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
XM_003055521.1 MicpuC2_37978, 37978 Regulator of chromosome condensation (RCC1) repeat;... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004555 alpha,alpha-trehalase activity IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005991 trehalose metabolic process IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
MF GO:0015927 trehalase activity IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 290 351
IPR000408 Reg_chr_condens 355 404
IPR000408 Reg_chr_condens 230 286
IPR000408 Reg_chr_condens 175 226
IPR000408 Reg_chr_condens 407 457
No external refs found!