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  5. XM_002504831.1

XM_002504831.1 (MICPUN_95428, 95428)


Aliases : MICPUN_95428, 95428

Description : Pre-mRNA-splicing factor Isy1 [Interproscan].


Gene families : OG_01_0002783 (OrthoFinder) Phylogenetic Tree(s): OG0002783_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002504831.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Cre10.g427150 30789885 RNA processing.RNA splicing.spliceosome-associated... 0.04 OrthoFinder
EOD16641 No alias Pre-mRNA-splicing factor Isy1 [Interproscan]. 0.03 OrthoFinder
EOD37788 No alias Pre-mRNA-splicing factor Isy1 [Interproscan]. 0.03 OrthoFinder
OT_04G03230.1 No alias Pre-mRNA-splicing factor Isy1 [Interproscan]. 0.03 OrthoFinder
Sro2445_g327900.1 Contig786.g8797 Splicing factor ISY1 homolog 0.02 OrthoFinder
Transcript_contig_58335 58335 Pre-mRNA-splicing factor Isy1 [Interproscan]. 0.02 OrthoFinder
Vocar.0005s0312.1 32883932 Pre-mRNA-splicing factor Isy1 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR009360 Isy1 1 254
No external refs found!