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  5. XM_002504697.1

XM_002504697.1 (MICPUN_84769, 84769)


Aliases : MICPUN_84769, 84769

Description : Cullin protein, neddylation domain; Cullin, N-terminal [Interproscan].


Gene families : OG_01_0000229 (OrthoFinder) Phylogenetic Tree(s): OG0000229_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002504697.1
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000157.110 tig00000157_g9709.t1 Cullin-4 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00000157.111 tig00000157_g9709.t1 Cullin-4 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cz01g09050.t1 No alias Cullin protein, neddylation domain; Cullin, N-terminal... 0.02 OrthoFinder
Cz09g29020.t1 No alias Cullin protein, neddylation domain; Cullin, N-terminal... 0.06 OrthoFinder
Dusal.0203s00008.1 33199265 Cullin protein, neddylation domain; Cullin, N-terminal... 0.01 OrthoFinder
EOD28143 No alias Cullin, N-terminal; Cullin protein, neddylation domain... 0.03 OrthoFinder
EOD28450 No alias Cullin, N-terminal; Cullin protein, neddylation domain... 0.05 OrthoFinder
OT_03G02820.1 No alias Cullin protein, neddylation domain; Cullin, N-terminal... 0.03 OrthoFinder
PTI_16G00930.1 No alias Cullin protein, neddylation domain; Cullin, N-terminal... 0.03 OrthoFinder
TP11G00740.1 No alias Cullin protein, neddylation domain; Cullin, N-terminal... 0.03 OrthoFinder
Transcript_contig_54536 54536 Cullin protein, neddylation domain; Cullin, N-terminal... 0.03 OrthoFinder
XM_003064607.1 MicpuC2_49280, 49280 Cullin, N-terminal [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000021.1_cds_PRW20903.1_5012 PRW20903 Cullin-1 0.04 OrthoFinder
lcl|LHPG02000023.1_cds_PRW20452.1_5392 PRW20452 Cullin family 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
MF GO:0031625 ubiquitin protein ligase binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR019559 Cullin_neddylation_domain 709 767
IPR001373 Cullin_N 54 678
No external refs found!