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  5. XM_002504588.1

XM_002504588.1 (MICPUN_61399, 61399)


Aliases : MICPUN_61399, 61399

Description : Protein of unknown function (DUF3223); RAP domain [Interproscan].


Gene families : OG_01_0000025 (OrthoFinder) Phylogenetic Tree(s): OG0000025_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002504588.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000385.16 tig00000385_g24743.t1 No description available 0.01 OrthoFinder
Cz19g00130.t1 No alias RAP domain [Interproscan]. 0.02 OrthoFinder
EOD13643 No alias RAP domain [Interproscan]. 0.01 OrthoFinder
EOD33506 No alias RAP domain [Interproscan]. 0.01 OrthoFinder
EOD38019 No alias RAP domain [Interproscan]. 0.01 OrthoFinder
OT_18G00330.1 No alias RAP domain [Interproscan]. 0.02 OrthoFinder
Sro1352_g265300.1 Contig343.g4649 RAP domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006528 asparagine metabolic process IEP Enrichment
BP GO:0006529 asparagine biosynthetic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
CC GO:0033588 elongator holoenzyme complex IEP Enrichment
InterPro domains Description Start Stop
IPR013584 RAP 785 850
No external refs found!