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  5. XM_002504568.1

XM_002504568.1 (MICPUN_61359, 61359)


Aliases : MICPUN_61359, 61359

Description : Mre11 DNA repair/recombination protein (MRE11)


Gene families : OG_01_0004553 (OrthoFinder) Phylogenetic Tree(s): OG0004553_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002504568.1
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000350.15 tig00000350_g24315.t1 DNA damage response.DNA repair mechanisms.homologous... 0.02 OrthoFinder
Dusal.0436s00004.1 33203582 Mre11, DNA-binding; Calcineurin-like phosphoesterase... 0.02 OrthoFinder
EOD35531 No alias Mre11, DNA-binding [Interproscan]. 0.02 OrthoFinder
Vocar.0001s1108.1 32885601 Calcineurin-like phosphoesterase domain, ApaH type;... 0.02 OrthoFinder
XM_003063559.1 MicpuC2_70239, 70239 Mre11 DNA repair/recombination protein (MRE11) 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006302 double-strand break repair IEA Interproscan
MF GO:0016787 hydrolase activity IEA Interproscan
MF GO:0030145 manganese ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Enrichment
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003964 RNA-directed DNA polymerase activity IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0007062 sister chromatid cohesion IEP Enrichment
BP GO:0007064 mitotic sister chromatid cohesion IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR007281 Mre11_DNA-bd 304 502
IPR004843 Calcineurin-like_PHP_ApaH 10 253
No external refs found!