XM_002504527.1 (MICPUN_61281, 61281)

Aliases : MICPUN_61281, 61281

Description : HELP; WD40 repeat [Interproscan].

Gene families : OG_01_0000109 (OrthoFinder) Phylogenetic Tree(s): OG0000109_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: XM_002504527.1
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.34 tig00000042_g15425.t1 Calpain-type cysteine protease DEK1 OS=Zea mays 0.03 OrthoFinder
Cre03.g178100 30787264 No description available 0.03 OrthoFinder
Cre06.g303400 30779939, FAP16 No description available 0.09 OrthoFinder
Cre10.g436000 30790221 No description available 0.04 OrthoFinder
Cre10.g436053 30790889 No description available 0.02 OrthoFinder
Cz05g14030.t1 No alias HELP; Anaphase-promoting complex subunit 4, WD40 domain;... 0.02 OrthoFinder
Cz11g19130.t1 No alias WD40 repeat; Anaphase-promoting complex subunit 4, WD40... 0.05 OrthoFinder
Dusal.0177s00014.1 33189755 WD40 repeat; PLAT/LH2 domain [Interproscan]. 0.04 OrthoFinder
Dusal.0177s00015.1 33189759 HELP [Interproscan]. 0.02 OrthoFinder
EOD04849 No alias HELP [Interproscan]. 0.02 OrthoFinder
EOD39577 No alias HELP [Interproscan]. 0.02 OrthoFinder
Vocar.0013s0017.1 32896445 WD40 repeat; HELP; Anaphase-promoting complex subunit 4,... 0.03 OrthoFinder
Vocar.0029s0133.1 32887586 WD40 repeat [Interproscan]. 0.05 OrthoFinder
XM_003056890.1 MicpuC2_56546, 56546 PLAT/LH2 domain; HELP [Interproscan]. 0.04 OrthoFinder
XM_003058024.1 MicpuC2_57171, 57171 PLAT/LH2 domain; Pleckstrin homology domain [Interproscan]. 0.02 OrthoFinder
XM_003058808.1 MicpuC2_6133, 6133 Hypothetical protein 0.04 OrthoFinder
XM_003061774.1 MicpuC2_20524, 20524 Hypothetical protein 0.05 OrthoFinder
XM_003061775.1 MicpuC2_63101, 63101 Hypothetical protein 0.04 OrthoFinder
XM_003061776.1 MicpuC2_48318, 48318 HELP [Interproscan]. 0.04 OrthoFinder
XM_003062633.1 MicpuC2_4590, 4590 WD40 repeat [Interproscan]. 0.05 OrthoFinder
XM_003063748.1 MicpuC2_42955, 42955 HELP; WD40 repeat [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000936.1_cds_GFH16043.1_10520 HaLaN_12389, GFH16043 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01000936.1_cds_GFH16045.1_10522 HaLaN_12391, GFH16045 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 524 575
IPR001680 WD40_repeat 875 907
IPR001680 WD40_repeat 342 379
IPR001680 WD40_repeat 729 750
IPR005108 HELP 274 336
No external refs found!