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  5. XM_002504500.1

XM_002504500.1 (MICPUN_107420, 107420)


Aliases : MICPUN_107420, 107420

Description : Hypothetical protein (EIF2A)


Gene families : OG_01_0002796 (OrthoFinder) Phylogenetic Tree(s): OG0002796_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002504500.1
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Cre12.g490000 30792971, EIF2A-2 Protein biosynthesis.translation... 0.08 OrthoFinder
EOD26755 No alias Translation initiation factor 2, alpha subunit; S1... 0.03 OrthoFinder
PTI_05G03780.1 No alias Translation initiation factor 2, alpha subunit; S1... 0.02 OrthoFinder
Sro236_g095090.1 Contig1410.g12947 Eukaryotic translation initiation factor 2 subunit 1 0.04 OrthoFinder
Sro347_g123020.1 Contig477.g6470 Eukaryotic translation initiation factor 2 subunit 1 0.09 OrthoFinder
SymbC1.scaffold1914.6 1914.6 Translation initiation factor 2, alpha subunit; S1... 0.02 OrthoFinder
Vocar.0031s0074.1 32890063 Translation initiation factor 2, alpha subunit; S1... 0.04 OrthoFinder
XM_003060071.1 MicpuC2_49642, 49642 Translation initiation factor 2, alpha subunit; S1... 0.05 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499961.1_8914 KAA8499961 Eukaryotic translation initiation factor 2 subunit alpha 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003743 translation initiation factor activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0004455 ketol-acid reductoisomerase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006438 valyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0009081 branched-chain amino acid metabolic process IEP Enrichment
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR011488 TIF_2_asu 119 237
IPR003029 S1_domain 7 81
No external refs found!