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  5. XM_002504498.1

XM_002504498.1 (MICPUN_107416, 107416)


Aliases : MICPUN_107416, 107416

Description : Hypothetical protein (H2A)


Gene families : OG_01_0000046 (OrthoFinder) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002504498.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Cre13.g567700 30783996 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder
OT_02G00110.1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.06 OrthoFinder
PTI_09G00030.1 No alias Histone H2A, C-terminal domain; Histone H2A/H2B/H3... 0.02 OrthoFinder
PTI_12G01390.1 No alias Histone H2A, C-terminal domain; Histone H2A/H2B/H3... 0.02 OrthoFinder
XM_003059786.1 MicpuC2_27647, 27647 Histone H2A 0.06 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60758.1_4580 PRW60758 Putative histone H2A variant 3 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP Enrichment
MF GO:0004556 alpha-amylase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0009653 anatomical structure morphogenesis IEP Enrichment
MF GO:0016160 amylase activity IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
BP GO:0032502 developmental process IEP Enrichment
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 19 108
IPR032454 Histone_H2A_C 109 140
No external refs found!