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  5. XM_002504263.1

XM_002504263.1 (MICPUN_108906, 108906)


Aliases : MICPUN_108906, 108906

Description : Ribosomal protein S15; Ribosomal protein S13/S15, N-terminal [Interproscan].


Gene families : OG_01_0003390 (OrthoFinder) Phylogenetic Tree(s): OG0003390_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002504263.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000489.15 tig00000489_g1374.t1 40S ribosomal protein S13 OS=Glycine max 0.09 OrthoFinder
Cre07.g331900 30774339, RPS13 Protein biosynthesis.cytosolic ribosome.small subunit... 0.54 OrthoFinder
Cz07g16040.t1 No alias Ribosomal protein S15 [Interproscan]. 0.28 OrthoFinder
Dusal.0017s00026.1 33200512 Ribosomal protein S15; Ribosomal protein S13/S15,... 0.3 OrthoFinder
EOD30715 No alias Ribosomal protein S15; Ribosomal protein S13/S15,... 0.15 OrthoFinder
EOD34926 No alias 40S ribosomal protein S13 [Ensembl]. 0.15 OrthoFinder
OT_01G03170.1 No alias Ribosomal protein S13/S15, N-terminal; Ribosomal protein... 0.32 OrthoFinder
PTI_01G02690.1 No alias Ribosomal protein S13/S15, N-terminal; Ribosomal protein... 0.41 OrthoFinder
Sro611_g175300.1 Contig1882.g16411 40S ribosomal protein S13 0.54 OrthoFinder
SymbC1.scaffold2720.1 2720.1 Glycosyltransferase, DXD sugar-binding motif; Ribosomal... 0.06 OrthoFinder
TP04G08460.1 No alias Ribosomal protein S15; Ribosomal protein S13/S15,... 0.31 OrthoFinder
Vocar.0034s0079.1 32893040 Ribosomal protein S15; Ribosomal protein S13/S15,... 0.01 OrthoFinder
XM_003063730.1 MicpuC2_49744, 49744 Ribosomal protein S13/S15, N-terminal; Ribosomal protein... 0.17 OrthoFinder
lcl|BLLF01005706.1_cds_GFH31540.1_26017 HaLaN_30603, GFH31540 Ribosomal_S13_N domain-containing protein 0.07 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56017.1_9996 PRW56017 40S ribosomal S13 0.09 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495591.1_1589 KAA8495591 40S ribosomal protein S13 0.23 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004055 argininosuccinate synthase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
BP GO:0006417 regulation of translation IEP Enrichment
BP GO:0006448 regulation of translational elongation IEP Enrichment
BP GO:0006449 regulation of translational termination IEP Enrichment
BP GO:0006525 arginine metabolic process IEP Enrichment
BP GO:0006526 arginine biosynthetic process IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0009891 positive regulation of biosynthetic process IEP Enrichment
BP GO:0009893 positive regulation of metabolic process IEP Enrichment
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
BP GO:0010628 positive regulation of gene expression IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0031325 positive regulation of cellular metabolic process IEP Enrichment
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Enrichment
BP GO:0034248 regulation of cellular amide metabolic process IEP Enrichment
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0043022 ribosome binding IEP Enrichment
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP Enrichment
BP GO:0043244 regulation of protein-containing complex disassembly IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0045727 positive regulation of translation IEP Enrichment
BP GO:0045901 positive regulation of translational elongation IEP Enrichment
BP GO:0045905 positive regulation of translational termination IEP Enrichment
BP GO:0048518 positive regulation of biological process IEP Enrichment
BP GO:0048522 positive regulation of cellular process IEP Enrichment
BP GO:0051130 positive regulation of cellular component organization IEP Enrichment
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051247 positive regulation of protein metabolic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
InterPro domains Description Start Stop
IPR000589 Ribosomal_S15 83 146
IPR012606 Ribosomal_S13/S15_N 1 60
No external refs found!