XM_002504224.1 (MICPUN_61300, 61300)

Aliases : MICPUN_61300, 61300

Description : ATP-dependent clp protease (CLP2)

Gene families : OG_01_0000068 (OrthoFinder) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: XM_002504224.1
Cluster	HCCA: Cluster_22

Target	Alias	Description	ECC score	Gene Family Method
Cre02.g090850	30785159, CLPB3	External stimuli response.temperature.Hsp...	0.02	OrthoFinder
Cz10g08290.t1	No alias	Clp ATPase, C-terminal; ClpA/ClpB, AAA lid domain;...	0.02	OrthoFinder
Dusal.0219s00011.1	33193390	ATPase, AAA-type, core; ClpA/ClpB, AAA lid domain; Clp...	0.02	OrthoFinder
Vocar.0034s0036.1	32893002	ClpA/ClpB, AAA lid domain; ATPase, AAA-type, core; Clp...	0.01	OrthoFinder
XM_003060040.1	MicpuC2_59476, 59476	ATP-dependent clp protease	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	Enrichment
MF	GO:0000149	SNARE binding	IEP	Enrichment
CC	GO:0005741	mitochondrial outer membrane	IEP	Enrichment
BP	GO:0006887	exocytosis	IEP	Enrichment
CC	GO:0019867	outer membrane	IEP	Enrichment
MF	GO:0019905	syntaxin binding	IEP	Enrichment
MF	GO:0030145	manganese ion binding	IEP	Enrichment
CC	GO:0031966	mitochondrial membrane	IEP	Enrichment
CC	GO:0031968	organelle outer membrane	IEP	Enrichment
BP	GO:0032940	secretion by cell	IEP	Enrichment
BP	GO:0046903	secretion	IEP	Enrichment
CC	GO:0098588	bounding membrane of organelle	IEP	Enrichment
CC	GO:0099023	vesicle tethering complex	IEP	Enrichment
BP	GO:0140352	export from cell	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR041546	ClpA/ClpB_AAA_lid	469	580
IPR003959	ATPase_AAA_core	677	854
IPR003959	ATPase_AAA_core	327	443
IPR019489	Clp_ATPase_C	860	938
IPR004176	Clp_R_dom	205	248
IPR004176	Clp_R_dom	120	145

External Links

No external refs found!