XM_002504219.1 (MICPUN_107429, 107429)


Aliases : MICPUN_107429, 107429

Description : Hypothetical protein (RFC5)


Gene families : OG_01_0002295 (OrthoFinder) Phylogenetic Tree(s): OG0002295_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002504219.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Cre12.g527300 30793001, RFC5 Cell cycle.interphase.DNA... 0.1 OrthoFinder
Cz05g24170.t1 No alias ATPase, AAA-type, core; Replication factor C, C-terminal... 0.06 OrthoFinder
EOD08878 No alias Putative replication factor C subunit 5 [Ensembl]. 0.07 OrthoFinder
EOD10892 No alias ATPase, AAA-type, core [Interproscan]. 0.07 OrthoFinder
Sro793_g203250.1 Contig534.g6933 Factor C small subunit 0.05 OrthoFinder
TP13G00440.1 No alias ATPase, AAA-type, core; Replication factor C, C-terminal... 0.01 OrthoFinder
Transcript_contig_55649 55649 Replication factor C, C-terminal; ATPase, AAA-type, core... 0.02 OrthoFinder
Vocar.0037s0052.1 32897481 ATPase, AAA-type, core; Replication factor C, C-terminal... 0.03 OrthoFinder
XM_003060047.1 MicpuC2_18318, 18318 Replication factor C, C-terminal; ATPase, AAA-type, core... 0.14 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499312.1_8265 KAA8499312 Replication factor C subunit 5 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004146 dihydrofolate reductase activity IEP Enrichment
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005815 microtubule organizing center IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006177 GMP biosynthetic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007096 regulation of exit from mitosis IEP Enrichment
BP GO:0007346 regulation of mitotic cell cycle IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009123 nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0031503 protein-containing complex localization IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0033566 gamma-tubulin complex localization IEP Enrichment
BP GO:0034453 microtubule anchoring IEP Enrichment
BP GO:0034629 cellular protein-containing complex localization IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0046037 GMP metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046653 tetrahydrofolate metabolic process IEP Enrichment
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
CC GO:0071821 FANCM-MHF complex IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 67 186
IPR013748 Rep_factorC_C 256 341
No external refs found!