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  5. XM_002504096.1

XM_002504096.1 (MICPUN_61047, 61047)


Aliases : MICPUN_61047, 61047

Description : Nucleoporin FG repeat [Interproscan].


Gene families : OG_01_0005445 (OrthoFinder) Phylogenetic Tree(s): OG0005445_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002504096.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Cre16.g685217 30777435 Protein translocation.nucleus.nucleocytoplasmic... 0.04 OrthoFinder
Cz07g14160.t1 No alias Hypothetical protein 0.02 OrthoFinder
Vocar.0022s0216.1 32891969 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005664 nuclear origin of replication recognition complex IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Enrichment
CC GO:0016592 mediator complex IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR025574 Nucleoporin_FG_rpt 716 800
IPR025574 Nucleoporin_FG_rpt 189 267
IPR025574 Nucleoporin_FG_rpt 1 92
No external refs found!