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  5. XM_002503801.1

XM_002503801.1 (MICPUN_59865, 59865)


Aliases : MICPUN_59865, 59865

Description : WD40 repeat [Interproscan].


Gene families : OG_01_0002214 (OrthoFinder) Phylogenetic Tree(s): OG0002214_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002503801.1
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Cre04.g226450 30791065, PRP17 RNA processing.RNA splicing.spliceosome-associated... 0.02 OrthoFinder
Cz12g25200.t1 No alias WD40 repeat [Interproscan]. 0.08 OrthoFinder
Dusal.0324s00009.1 33186994 WD40 repeat [Interproscan]. 0.02 OrthoFinder
OT_10G01120.1 No alias WD40 repeat [Interproscan]. 0.02 OrthoFinder
Transcript_contig_58245 58245 WD40 repeat [Interproscan]. 0.04 OrthoFinder
Transcript_contig_82281 82281 Hypothetical protein 0.02 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45460.1_1620 PRW45460 Pre-mRNA-processing factor 17-like isoform X1 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 532 566
IPR001680 WD40_repeat 573 609
IPR001680 WD40_repeat 439 475
IPR001680 WD40_repeat 311 349
IPR001680 WD40_repeat 354 392
No external refs found!