1. Home
  2. Species
  3. Micromonas commoda
  4. Sequence
  5. XM_002503573.1

XM_002503573.1 (MICPUN_60106, 60106)


Aliases : MICPUN_60106, 60106

Description : Transcription factor CBF/NF-Y/archaeal histone domain [Interproscan].


Gene families : OG_01_0000661 (OrthoFinder) Phylogenetic Tree(s): OG0000661_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002503573.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000057.46 tig00000057_g65.t1 Cell cycle.interphase.DNA replication.elongation.DNA... 0.05 OrthoFinder
Cre07.g341800 30775065 Cell cycle.interphase.DNA replication.elongation.DNA... 0.06 OrthoFinder
Cz10g08040.t1 No alias Transcription factor CBF/NF-Y/archaeal histone domain... 0.02 OrthoFinder
Cz10g24060.t1 No alias Transcription factor CBF/NF-Y/archaeal histone domain... 0.02 OrthoFinder
EOD23620 No alias Transcription factor CBF/NF-Y/archaeal histone domain... 0.03 OrthoFinder
EOD25995 No alias DNA polymerase epsilon catalytic subunit 3 [Ensembl]. 0.04 OrthoFinder
OT_07G03550.1 No alias Transcription factor CBF/NF-Y/archaeal histone domain... 0.08 OrthoFinder
Sro256_g100540.1 Contig3587.g27699 Polymerase epsilon subunit 3 0.04 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44627.1_2298 PRW44627 DNA polymerase epsilon subunit 3 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0003872 6-phosphofructokinase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP Enrichment
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006333 chromatin assembly or disassembly IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0007021 tubulin complex assembly IEP Enrichment
BP GO:0007023 post-chaperonin tubulin folding pathway IEP Enrichment
BP GO:0007275 multicellular organism development IEP Enrichment
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Enrichment
MF GO:0008443 phosphofructokinase activity IEP Enrichment
BP GO:0009555 pollen development IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019200 carbohydrate kinase activity IEP Enrichment
BP GO:0031503 protein-containing complex localization IEP Enrichment
BP GO:0032501 multicellular organismal process IEP Enrichment
BP GO:0032502 developmental process IEP Enrichment
BP GO:0032954 regulation of cytokinetic process IEP Enrichment
BP GO:0032955 regulation of division septum assembly IEP Enrichment
BP GO:0033566 gamma-tubulin complex localization IEP Enrichment
BP GO:0034629 cellular protein-containing complex localization IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0044087 regulation of cellular component biogenesis IEP Enrichment
BP GO:0048229 gametophyte development IEP Enrichment
MF GO:0048487 beta-tubulin binding IEP Enrichment
BP GO:0048856 anatomical structure development IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051301 cell division IEP Enrichment
CC GO:0071821 FANCM-MHF complex IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:1901891 regulation of cell septum assembly IEP Enrichment
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 39 86
No external refs found!