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  5. XM_002503317.1

XM_002503317.1 (MICPUN_59600, 59600)


Aliases : MICPUN_59600, 59600

Description : Tetratricopeptide, SHNi-TPR domain [Interproscan].


Gene families : OG_01_0003027 (OrthoFinder) Phylogenetic Tree(s): OG0003027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002503317.1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021105.53 tig00021105_g18264.t1 Chromatin organisation.histone chaperone... 0.03 OrthoFinder
Cre06.g280800 30779249 Chromatin organisation.histone chaperone... 0.04 OrthoFinder
Cz15g09030.t1 No alias Tetratricopeptide, SHNi-TPR domain [Interproscan]. 0.03 OrthoFinder
OT_08G00310.1 No alias Tetratricopeptide, SHNi-TPR domain [Interproscan]. 0.03 OrthoFinder
Vocar.0002s0057.1 32890844 Hypothetical protein 0.02 OrthoFinder
XM_003058337.1 MicpuC2_17192, 17192 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01000545.1_cds_GFH12834.1_7311 HaLaN_08593, GFH12834 Hypothetical protein 0.01 OrthoFinder
lcl|LHPG02000001.1_cds_PRW60974.1_369 PRW60974 TPR domain containing 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000724 double-strand break repair via homologous recombination IEP Enrichment
BP GO:0000725 recombinational repair IEP Enrichment
CC GO:0001401 SAM complex IEP Enrichment
MF GO:0004797 thymidine kinase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005742 mitochondrial outer membrane translocase complex IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0019136 deoxynucleoside kinase activity IEP Enrichment
MF GO:0019206 nucleoside kinase activity IEP Enrichment
BP GO:0030099 myeloid cell differentiation IEP Enrichment
BP GO:0030154 cell differentiation IEP Enrichment
BP GO:0030218 erythrocyte differentiation IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
CC GO:0042575 DNA polymerase complex IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
CC GO:0043625 delta DNA polymerase complex IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
BP GO:0048869 cellular developmental process IEP Enrichment
CC GO:0098799 outer mitochondrial membrane protein complex IEP Enrichment
InterPro domains Description Start Stop
IPR019544 Tetratricopeptide_SHNi-TPR_dom 172 205
No external refs found!