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  5. XM_002503130.1

XM_002503130.1 (MICPUN_59217, 59217)


Aliases : MICPUN_59217, 59217

Description : Ribosomal protein L18 (RPL18.1)


Gene families : OG_01_0004009 (OrthoFinder) Phylogenetic Tree(s): OG0004009_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002503130.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Cre01.g052100 30788991, PRPL18 Protein biosynthesis.organelle translation... 0.19 OrthoFinder
Cz09g08170.t1 No alias Ribosomal protein L18 [Interproscan]. 0.14 OrthoFinder
Dusal.0423s00013.1 33192022 Ribosomal protein L18 [Interproscan]. 0.03 OrthoFinder
OT_07G04560.1 No alias Ribosomal protein L18 [Interproscan]. 0.22 OrthoFinder
Sro51_chlor_g029630.1 Rpl18 Rpl18 0.08 OrthoFinder
SymbC1.scaffold436.6 436.6 Ribosomal protein L18 [Interproscan]. 0.02 OrthoFinder
TPCG02610.1 No alias Ribosomal protein L18 [Interproscan]. 0.08 OrthoFinder
Transcript_contig_59895 59895 Ribosomal protein L18 [Interproscan]. 0.02 OrthoFinder
Vocar.0001s0412.1 32884219 Ribosomal protein L18 [Interproscan]. 0.08 OrthoFinder
XM_003061146.1 MicpuC2_28274, 28274 Ribosomal protein L18 [Interproscan]. 0.13 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56666.1_9892 PRW56666 50S ribosomal L18 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
MF GO:0004556 alpha-amylase activity IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006537 glutamate biosynthetic process IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
MF GO:0015252 proton channel activity IEP Enrichment
MF GO:0015930 glutamate synthase activity IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Enrichment
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
InterPro domains Description Start Stop
IPR005484 Ribosomal_L18 38 157
No external refs found!