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  5. XM_002503104.1

XM_002503104.1 (MICPUN_59166, 59166)


Aliases : MICPUN_59166, 59166

Description : eIF3 subunit M, C-terminal helix domain; Proteasome component (PCI) domain [Interproscan].


Gene families : OG_01_0003784 (OrthoFinder) Phylogenetic Tree(s): OG0003784_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002503104.1
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020903.23 tig00020903_g15091.t1 Protein biosynthesis.translation... 0.02 OrthoFinder
Dusal.0066s00033.1 33195464 eIF3 subunit M, C-terminal helix domain; Proteasome... 0.02 OrthoFinder
EOD36444 No alias Proteasome component (PCI) domain [Interproscan]. 0.03 OrthoFinder
OT_12G01440.1 No alias Proteasome component (PCI) domain [Interproscan]. 0.05 OrthoFinder
PTI_12G01060.1 No alias eIF3 subunit M, C-terminal helix domain; Proteasome... 0.03 OrthoFinder
Sro1618_g286410.1 Contig4550.g34008 Signalosome and eIF3 complex-shared subunit 1 0.03 OrthoFinder
UNPLg00119.t1 No alias Proteasome component (PCI) domain [Interproscan]. 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499515.1_8468 KAA8499515 Eukaryotic translation initiation factor 3 subunit M 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR040750 eIF3m_C_helix 364 388
IPR000717 PCI_dom 261 359
No external refs found!