Aliases : MICPUN_82984, 82984
Description : Photosystem II 13kD protein, chloroplast precursor (PSBW1)
Gene families : OG_01_0005372 (OrthoFinder) Phylogenetic Tree(s): OG0005372_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: XM_002503059.1 | |
Cluster | HCCA: Cluster_27 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre10.g440450 | 30790206, PSB28 | Photosynthesis.photophosphorylation.photosystem... | 0.06 | OrthoFinder | |
Sro1425_g271500.1 | Contig1471.g13478 | II reaction center PSB28 protein | 0.02 | OrthoFinder | |
Vocar.0001s1283.1 | 32884980 | Photosystem II Psb28, class 1 [Interproscan]. | 0.02 | OrthoFinder | |
XM_003061076.1 | MicpuC2_19538, 19538 | Photosystem II 13kD protein, chloroplast precursor (PSBW1) | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0009523 | photosystem II | IEA | Interproscan |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEA | Interproscan |
BP | GO:0015979 | photosynthesis | IEA | Interproscan |
CC | GO:0016020 | membrane | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | Enrichment |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Enrichment |
BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Enrichment |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Enrichment |
MF | GO:0008113 | peptide-methionine (S)-S-oxide reductase activity | IEP | Enrichment |
MF | GO:0008942 | nitrite reductase [NAD(P)H] activity | IEP | Enrichment |
BP | GO:0010207 | photosystem II assembly | IEP | Enrichment |
BP | GO:0016485 | protein processing | IEP | Enrichment |
MF | GO:0016661 | oxidoreductase activity, acting on other nitrogenous compounds as donors | IEP | Enrichment |
MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Enrichment |
MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Enrichment |
MF | GO:0016874 | ligase activity | IEP | Enrichment |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Enrichment |
BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
BP | GO:0043038 | amino acid activation | IEP | Enrichment |
BP | GO:0043039 | tRNA aminoacylation | IEP | Enrichment |
MF | GO:0046857 | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor | IEP | Enrichment |
BP | GO:0051604 | protein maturation | IEP | Enrichment |
BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
BP | GO:0071586 | CAAX-box protein processing | IEP | Enrichment |
MF | GO:0098809 | nitrite reductase activity | IEP | Enrichment |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005610 | PSII_Psb28_class-1 | 9 | 114 |
No external refs found! |