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  5. XM_002502680.1

XM_002502680.1 (MICPUN_108362, 108362)


Aliases : MICPUN_108362, 108362

Description : Carbohydrate-binding module family 20 protein


Gene families : OG_01_0000144 (OrthoFinder) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002502680.1
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
Cz04g29100.t1 No alias Carbohydrate binding module family 20 [Interproscan]. 0.02 OrthoFinder
Dusal.0598s00003.1 33189785 Carbohydrate binding module family 20 [Interproscan]. 0.03 OrthoFinder
Transcript_contig_54066 54066 Carbohydrate binding module family 20 [Interproscan]. 0.01 OrthoFinder
Transcript_contig_89912 89912 Carbohydrate binding module family 20 [Interproscan]. 0.02 OrthoFinder
XM_002505085.1 MICPUN_106222, 106222 Carbohydrate binding module family 20 [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000260.1_cds_GFH09765.1_4242 HaLaN_04969, GFH09765 CBM20 domain-containing protein 0.03 OrthoFinder
lcl|BLLF01000632.1_cds_GFH13608.1_8085 HaLaN_09533, GFH13608 CBM20 domain-containing protein 0.01 OrthoFinder
lcl|BLLF01003450.1_cds_GFH27372.1_21849 HaLaN_25679, GFH27372 CBM20 domain-containing protein 0.03 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56450.1_9465 PRW56450 Ribonuclease E G chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:2001070 starch binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0016421 CoA carboxylase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Enrichment
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002044 CBM_fam20 111 195
No external refs found!