XM_002502551.1 (MICPUN_108309, 108309)

Aliases : MICPUN_108309, 108309

Description : Ribosomal protein L34 [Interproscan].

Gene families : OG_01_0004351 (OrthoFinder) Phylogenetic Tree(s): OG0004351_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: XM_002502551.1
Cluster	HCCA: Cluster_51

Target	Alias	Description	ECC score	Gene Family Method
Cre01.g030050	30788509, PRPL34	Protein biosynthesis.organelle translation...	0.14	OrthoFinder
OT_05G03900.1	No alias	Ribosomal protein L34 [Interproscan].	0.2	OrthoFinder
TPCG02020.1	No alias	Ribosomal protein L34 [Interproscan].	0.05	OrthoFinder
TPCG02990.1	No alias	Ribosomal protein L34 [Interproscan].	0.05	OrthoFinder
Transcript_contig_56760	56760	Ribosomal protein L34 [Interproscan].	0.01	OrthoFinder
Vocar.0001s0912.1	32885424	Ribosomal protein L34 [Interproscan].	0.1	OrthoFinder
XM_003059178.1	MicpuC2_27297, 27297	Ribosomal protein L34 [Interproscan].	0.03	OrthoFinder
lcl\|BLLF01002151.1_cds_GFH22905.1_17382	HaLaN_20436, GFH22905	Hypothetical protein	0.02	OrthoFinder
lcl\|BLLF01007548.1_cds_GFH32999.1_27476	HaLaN_32308, GFH32999	Ribosomal protein L34 [Interproscan].	0.03	OrthoFinder
lcl\|LHPG02000003.1_cds_PRW60083.1_6540	PRW60083	50S ribosomal L34	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004019	adenylosuccinate synthase activity	IEP	Enrichment
BP	GO:0006457	protein folding	IEP	Enrichment
CC	GO:0009507	chloroplast	IEP	Enrichment
CC	GO:0009536	plastid	IEP	Enrichment
MF	GO:0019843	rRNA binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000271	Ribosomal_L34	89	128

External Links

No external refs found!

XM_002502551.1 (MICPUN_108309, 108309)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation