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  5. XM_002502528.1

XM_002502528.1 (MICPUN_58711, 58711)


Aliases : MICPUN_58711, 58711

Description : TWY3 methyltransferase


Gene families : OG_01_0001834 (OrthoFinder) Phylogenetic Tree(s): OG0001834_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002502528.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Cre14.g626634 30776759 tRNA wybutosine-synthesizing protein 2/3/4 OS=Oryza... 0.02 OrthoFinder
Sro107_g054020.1 Contig1548.g14077 Synthesizing protein 2/3/4 0.02 OrthoFinder
Vocar.0022s0107.1 32891811 Galactose oxidase, central domain; Cupin-like domain 8;... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Enrichment
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Enrichment
MF GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006402 mRNA catabolic process IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
BP GO:0010629 negative regulation of gene expression IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR030382 MeTrfase_TRM5/TYW2 422 597
IPR041667 Cupin_8 735 979
IPR003827 tRNA_yW-synthesising 10 211
No external refs found!