XM_002502425.1 (MICPUN_58505, 58505)


Aliases : MICPUN_58505, 58505

Description : Nucleosome/chromatin assembly complex protein


Gene families : OG_01_0001025 (OrthoFinder) Phylogenetic Tree(s): OG0001025_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002502425.1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020629.12 tig00020629_g12332.t1 Chromatin assembly factor 1 subunit FAS2 homolog... 0.03 OrthoFinder
Cpa|evm.model.tig00021108.30 tig00021108_g18320.t1 Chromatin organisation.histone chaperone... 0.02 OrthoFinder
Cre13.g575950 30784220 Chromatin organisation.histone chaperone... 0.03 OrthoFinder
Cz19g03120.t1 No alias WD40 repeat [Interproscan]. 0.06 OrthoFinder
EOD03923 No alias WD40 repeat [Interproscan]. 0.06 OrthoFinder
OT_07G04030.1 No alias TUP1-like enhancer of split; WD40 repeat [Interproscan]. 0.03 OrthoFinder
PTI_03G02510.1 No alias TUP1-like enhancer of split; WD40 repeat [Interproscan]. 0.02 OrthoFinder
Sro717_g192090.1 Contig1315.g12156 Chromatin assembly factor 1 subunit FAS2 homolog 0.02 OrthoFinder
Sro841_g209590.1 Contig2025.g17357 Chromatin assembly factor 1 subunit FAS2 homolog 0.03 OrthoFinder
Transcript_contig_57412 57412 WD40 repeat [Interproscan]. 0.02 OrthoFinder
Vocar.0001s0163.1 32885464 WD40 repeat; TUP1-like enhancer of split [Interproscan]. 0.02 OrthoFinder
XM_003056922.1 MicpuC2_15055, 15055 Nucleosome/chromatin assembly complex protein 0.11 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000724 double-strand break repair via homologous recombination IEP Enrichment
BP GO:0000725 recombinational repair IEP Enrichment
CC GO:0001401 SAM complex IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003852 2-isopropylmalate synthase activity IEP Enrichment
MF GO:0004797 thymidine kinase activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005742 mitochondrial outer membrane translocase complex IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Enrichment
BP GO:0006551 leucine metabolic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009098 leucine biosynthetic process IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0019136 deoxynucleoside kinase activity IEP Enrichment
MF GO:0019206 nucleoside kinase activity IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
CC GO:0042575 DNA polymerase complex IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
CC GO:0043625 delta DNA polymerase complex IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
CC GO:0098799 outer mitochondrial membrane protein complex IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 162 195
IPR001680 WD40_repeat 25 51
IPR001680 WD40_repeat 64 99
IPR001680 WD40_repeat 120 154
No external refs found!