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  5. XM_002502358.1

XM_002502358.1 (MICPUN_58373, 58373)


Aliases : MICPUN_58373, 58373

Description : Bromodomain-containing protein


Gene families : OG_01_0003660 (OrthoFinder) Phylogenetic Tree(s): OG0003660_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002502358.1
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001042.14 tig00001042_g6591.t1 ATPase family AAA domain-containing protein At1g05910... 0.04 OrthoFinder
Cre01.g038151 30788529 ATPase family AAA domain-containing protein At1g05910... 0.04 OrthoFinder
Cz09g14160.t1 No alias AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;... 0.04 OrthoFinder
OT_13G00030.1 No alias ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... 0.03 OrthoFinder
XM_003056984.1 MicpuC2_56755, 56755 Bromodomain-containing protein 0.04 OrthoFinder
XM_003058522.1 MicpuC2_17436, 17436 ATPase, AAA-type, core [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000724 double-strand break repair via homologous recombination IEP Enrichment
BP GO:0000725 recombinational repair IEP Enrichment
MF GO:0003964 RNA-directed DNA polymerase activity IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
CC GO:0042575 DNA polymerase complex IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
CC GO:0043625 delta DNA polymerase complex IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
InterPro domains Description Start Stop
IPR001487 Bromodomain 956 1026
IPR041569 AAA_lid_3 522 560
IPR003959 ATPase_AAA_core 361 495
No external refs found!