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  5. XM_002502309.1

XM_002502309.1 (MICPUN_106883, 106883)


Aliases : MICPUN_106883, 106883

Description : Ribosomal protein S21 [Interproscan].


Gene families : OG_01_0003986 (OrthoFinder) Phylogenetic Tree(s): OG0003986_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002502309.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Cre01.g017300 30788961, PRPS21 Protein biosynthesis.organelle translation... 0.21 OrthoFinder
Cz05g29050.t1 No alias Ribosomal protein S21 [Interproscan]. 0.16 OrthoFinder
OT_13G00070.1 No alias Ribosomal protein S21 [Interproscan]. 0.2 OrthoFinder
PTI_01G08370.1 No alias Ribosomal protein S21 [Interproscan]. 0.01 OrthoFinder
Sro408_g136810.1 Contig3193.g25216 Protein S21 0.01 OrthoFinder
TP01G10880.1 No alias Hypothetical protein 0.03 OrthoFinder
Transcript_contig_58870 58870 Ribosomal protein S21 [Interproscan]. 0.02 OrthoFinder
Vocar.0007s0436.1 32888148 Hypothetical protein 0.12 OrthoFinder
XM_003057031.1 MicpuC2_32701, 32701 Ribosomal protein S21 [Interproscan]. 0.1 OrthoFinder
lcl|BLLF01000429.1_cds_GFH11718.1_6195 HaLaN_07264, GFH11718 Ribosomal protein S21 [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59257.1_7008 PRW59257 30S ribosomal S21 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004827 proline-tRNA ligase activity IEP Enrichment
MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006433 prolyl-tRNA aminoacylation IEP Enrichment
BP GO:0006438 valyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006528 asparagine metabolic process IEP Enrichment
BP GO:0006529 asparagine biosynthetic process IEP Enrichment
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0015252 proton channel activity IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034311 diol metabolic process IEP Enrichment
BP GO:0034312 diol biosynthetic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046146 tetrahydrobiopterin metabolic process IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001911 Ribosomal_S21 21 73
No external refs found!