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  5. Cpa|evm.model.tig00022075.8

Cpa|evm.model.tig00022075.8 (tig00022075_g23571.t1)


Aliases : tig00022075_g23571.t1

No description available


Gene families : OG_01_0004102 (OrthoFinder) Phylogenetic Tree(s): OG0004102_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00022075.8
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Cre07.g328200 30774423, PSBP6 PsbP domain-containing protein 5, chloroplastic... 0.06 OrthoFinder
Dusal.0641s00011.1 33186224 PsbP, C-terminal [Interproscan]. 0.02 OrthoFinder
OT_15G01320.1 No alias PsbP, C-terminal [Interproscan]. 0.05 OrthoFinder
Transcript_contig_56615 56615 Hypothetical protein 0.02 OrthoFinder
Vocar.0017s0025.1 32891407 PsbP, C-terminal [Interproscan]. 0.05 OrthoFinder
XM_002501923.1 MICPUN_80859, 80859 PsbP, C-terminal [Interproscan]. 0.05 OrthoFinder
lcl|BLLF01003595.1_cds_GFH27732.1_22209 HaLaN_26106, GFH27732 PsbP domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP Enrichment
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004655 porphobilinogen synthase activity IEP Enrichment
BP GO:0006479 protein methylation IEP Enrichment
BP GO:0006480 N-terminal protein amino acid methylation IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0008213 protein alkylation IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0015994 chlorophyll metabolic process IEP Enrichment
BP GO:0015995 chlorophyll biosynthetic process IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
BP GO:0031365 N-terminal protein amino acid modification IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002683 PsbP_C 201 306
No external refs found!