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  5. Cpa|evm.model.tig00022075.68

Cpa|evm.model.tig00022075.68 (tig00022075_g23630.t1)


Aliases : tig00022075_g23630.t1

Description : Enzyme classification.EC_6 ligases.EC_6.1 ligase forming carbon-oxygen bond(50.6.1 : 414.3) & Leucine--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana


Gene families : OG_01_0002069 (OrthoFinder) Phylogenetic Tree(s): OG0002069_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00022075.68
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Cre06.g293582 30779793 Enzyme classification.EC_6 ligases.EC_6.1 ligase forming... 0.04 OrthoFinder
Cz11g18060.t1 No alias Aminoacyl-tRNA synthetase, class Ia;... 0.03 OrthoFinder
Cz11g18070.t1 No alias Aminoacyl-tRNA synthetase, class Ia [Interproscan]. 0.05 OrthoFinder
Cz11g18080.t1 No alias Hypothetical protein 0.04 OrthoFinder
Dusal.1204s00003.1 33186416 Methionyl/Leucyl tRNA synthetase;... 0.02 OrthoFinder
EOD13982 No alias Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase,... 0.02 OrthoFinder
EOD38100 No alias Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase,... 0.01 OrthoFinder
OT_04G01650.1 No alias Aminoacyl-tRNA synthetase, class Ia;... 0.03 OrthoFinder
PTI_04G03430.1 No alias Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase,... 0.02 OrthoFinder
Sro166_g074040.1 Contig1709.g15283 Leucine--tRNA ligase, cytoplasmic 0.03 OrthoFinder
Vocar.0001s1373.1 32885656 Aminoacyl-tRNA synthetase, class Ia;... 0.02 OrthoFinder
XM_002501446.1 MICPUN_80747, 80747 Aminoacyl-tRNA synthetase, class Ia;... 0.02 OrthoFinder
XM_003057963.1 MicpuC2_46961, 46961 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase,... 0.02 OrthoFinder
lcl|LHPG02000022.1_cds_PRW20658.1_5220 PRW20658 Leucine-tRNA cytoplasmic 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Enrichment
CC GO:0000124 SAGA complex IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004512 inositol-3-phosphate synthase activity IEP Enrichment
BP GO:0006020 inositol metabolic process IEP Enrichment
BP GO:0006021 inositol biosynthetic process IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
CC GO:0031248 protein acetyltransferase complex IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
CC GO:0070461 SAGA-type complex IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
CC GO:1902493 acetyltransferase complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR002300 aa-tRNA-synth_Ia 25 106
No external refs found!