XM_002502037.1 (MICPUN_97374, 97374)

Aliases : MICPUN_97374, 97374

Description : Tetratricopeptide repeat; HAT (Half-A-TPR) repeat [Interproscan].

Gene families : OG_01_0001985 (OrthoFinder) Phylogenetic Tree(s): OG0001985_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: XM_002502037.1
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000128.3 tig00000128_g7203.t1 RNA processing.RNA splicing.spliceosome-associated... 0.02 OrthoFinder
Cre14.g621000 30776341 RNA processing.RNA splicing.spliceosome-associated... 0.06 OrthoFinder
Cz12g18090.t1 No alias HAT (Half-A-TPR) repeat [Interproscan]. 0.06 OrthoFinder
Dusal.0283s00017.1 33200578 Suppressor of forked [Interproscan]. 0.03 OrthoFinder
EOD31621 No alias HAT (Half-A-TPR) repeat [Interproscan]. 0.02 OrthoFinder
EOD40093 No alias HAT (Half-A-TPR) repeat [Interproscan]. 0.03 OrthoFinder
OT_07G03650.1 No alias HAT (Half-A-TPR) repeat [Interproscan]. 0.04 OrthoFinder
PTI_07G04100.1 No alias PiggyBac transposable element-derived protein; HAT... 0.02 OrthoFinder
Transcript_contig_56548 56548 HAT (Half-A-TPR) repeat [Interproscan]. 0.02 OrthoFinder
Vocar.0004s0261.1 32889891 HAT (Half-A-TPR) repeat [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01006138.1_cds_GFH31989.1_26466 HaLaN_31131, GFH31989 HAT (Half-A-TPR) repeat [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59332.1_7330 PRW59332 Crooked neck 1 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Enrichment
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR003107 HAT 205 234
IPR019734 TPR_repeat 465 487
No external refs found!