XM_002501913.1 (MICPUN_105511, 105511)

Aliases : MICPUN_105511, 105511

Description : Replication protein A, OB domain; Zinc finger, CCHC-type; Replication factor A, C-terminal; Replication factor-A protein 1, N-terminal; OB-fold nucleic acid binding domain, AA-tRNA synthetase-type [Interproscan].

Gene families : OG_01_0000974 (OrthoFinder) Phylogenetic Tree(s): OG0000974_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: XM_002501913.1
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
XM_003057530.1 MicpuC2_32742, 32742 Replication protein A, OB domain; Replication factor-A... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003964 RNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
MF GO:0008184 glycogen phosphorylase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
MF GO:0019900 kinase binding IEP Enrichment
MF GO:0019901 protein kinase binding IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR004365 NA-bd_OB_tRNA 247 332
IPR013955 Rep_factor-A_C 522 676
IPR031657 REPA_OB_2 359 463
IPR001878 Znf_CCHC 776 792
IPR001878 Znf_CCHC 815 831
IPR007199 Rep_factor-A_N 9 104
No external refs found!