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  5. XM_002501851.1

XM_002501851.1 (MICPUN_58110, 58110)


Aliases : MICPUN_58110, 58110

Description : MIF4G-like, type 3; Up-frameshift suppressor 2, C-terminal [Interproscan].


Gene families : OG_01_0002867 (OrthoFinder) Phylogenetic Tree(s): OG0002867_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002501851.1
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
PTI_27G00580.1 No alias Up-frameshift suppressor 2, C-terminal; MIF4G-like, type... 0.02 OrthoFinder
Transcript_contig_56563 56563 MIF4G-like, type 3 [Interproscan]. 0.01 OrthoFinder
XM_003057592.1 MicpuC2_46957, 46957 Up-frameshift suppressor 2, C-terminal; MIF4G-like, type... 0.02 OrthoFinder
lcl|BLLF01000665.1_cds_GFH13898.1_8375 HaLaN_09862, GFH13898 MIF4G domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57003.1_9102 PRW57003 Regulator of nonsense transcripts UPF2 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0016197 endosomal transport IEP Enrichment
BP GO:0016482 cytosolic transport IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
BP GO:0042147 retrograde transport, endosome to Golgi IEP Enrichment
InterPro domains Description Start Stop
IPR007193 Upf2/Nmd2_C 1056 1167
IPR003890 MIF4G-like_typ-3 540 692
IPR003890 MIF4G-like_typ-3 759 936
No external refs found!