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  5. XM_002501798.1

XM_002501798.1 (MICPUN_80773, 80773)


Aliases : MICPUN_80773, 80773

Description : LSM domain, eukaryotic/archaea-type [Interproscan].


Gene families : OG_01_0000904 (OrthoFinder) Phylogenetic Tree(s): OG0000904_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002501798.1
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Cre06.g251300 30779242 RNA processing.RNA splicing.U6-associated LSm accessory... 0.05 OrthoFinder
SymbC1.scaffold3926.5 3926.5 LSM domain, eukaryotic/archaea-type [Interproscan]. 0.05 OrthoFinder
XM_003059126.1 MicpuC2_69519, 69519 LSM domain, eukaryotic/archaea-type [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000007.1_cds_KAA8493116.1_9417 KAA8493116 Small nuclear ribonucleoprotein SmD3b 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 6 70
No external refs found!