- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : MICPUN_57945, 57945
Description : BP28, C-terminal domain; U3 small nucleolar RNA-associated protein 10, N-terminal [Interproscan].
Gene families : OG_01_0001400 (OrthoFinder) Phylogenetic Tree(s): OG0001400_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: XM_002501766.1 | |
| Cluster | HCCA: Cluster_24 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre12.g548000 | 30793370 | Uncharacterized protein At3g06530 OS=Arabidopsis thaliana | 0.03 | OrthoFinder | |
| Cz07g10090.t1 | No alias | U3 small nucleolar RNA-associated protein 10, N-terminal... | 0.03 | OrthoFinder | |
| Cz07g10100.t1 | No alias | BP28, C-terminal domain [Interproscan]. | 0.06 | OrthoFinder | |
| EOD15958 | No alias | BP28, C-terminal domain [Interproscan]. | 0.06 | OrthoFinder | |
| OT_08G00810.1 | No alias | BP28, C-terminal domain; U3 small nucleolar... | 0.07 | OrthoFinder | |
| PTI_08G04460.1 | No alias | BP28, C-terminal domain; U3 small nucleolar... | 0.11 | OrthoFinder | |
| Sro819_g207040.1 | Contig8.g90 | HEAT repeat-containing protein 1 | 0.06 | OrthoFinder | |
| TP06G00080.1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| Transcript_contig_53878 | 53878 | BP28, C-terminal domain; U3 small nucleolar... | 0.02 | OrthoFinder | |
| Vocar.0007s0207.1 | 32888237 | U3 small nucleolar RNA-associated protein 10,... | 0.04 | OrthoFinder | |
| XM_003058444.1 | MicpuC2_68174, 68174 | Hypothetical protein | 0.08 | OrthoFinder | |
| XM_003058445.1 | MicpuC2_58070, 58070 | BP28, C-terminal domain [Interproscan]. | 0.07 | OrthoFinder | |
| lcl|LHPG02000001.1_cds_PRW61623.1_230 | PRW61623 | U3 small nucleolar RNA-associated protein 10,... | 0.05 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001510 | RNA methylation | IEP | Enrichment |
| BP | GO:0002097 | tRNA wobble base modification | IEP | Enrichment |
| BP | GO:0002098 | tRNA wobble uridine modification | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity | IEP | Enrichment |
| MF | GO:0004386 | helicase activity | IEP | Enrichment |
| CC | GO:0005730 | nucleolus | IEP | Enrichment |
| CC | GO:0005737 | cytoplasm | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
| BP | GO:0006400 | tRNA modification | IEP | Enrichment |
| BP | GO:0006528 | asparagine metabolic process | IEP | Enrichment |
| BP | GO:0006529 | asparagine biosynthetic process | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0008033 | tRNA processing | IEP | Enrichment |
| MF | GO:0008094 | ATPase, acting on DNA | IEP | Enrichment |
| MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Enrichment |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0009451 | RNA modification | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Enrichment |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
| BP | GO:0030488 | tRNA methylation | IEP | Enrichment |
| CC | GO:0031515 | tRNA (m1A) methyltransferase complex | IEP | Enrichment |
| CC | GO:0033588 | elongator holoenzyme complex | IEP | Enrichment |
| BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
| CC | GO:0034708 | methyltransferase complex | IEP | Enrichment |
| BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
| BP | GO:0043412 | macromolecule modification | IEP | Enrichment |
| BP | GO:0043414 | macromolecule methylation | IEP | Enrichment |
| CC | GO:0043527 | tRNA methyltransferase complex | IEP | Enrichment |
| BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Enrichment |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| No external refs found! |