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  5. XM_002501559.1

XM_002501559.1 (MICPUN_106836, 106836)


Aliases : MICPUN_106836, 106836

Description : Cullin protein, neddylation domain; Cullin, N-terminal [Interproscan].


Gene families : OG_01_0000229 (OrthoFinder) Phylogenetic Tree(s): OG0000229_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002501559.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000157.110 tig00000157_g9709.t1 Cullin-4 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00020563.191 tig00020563_g11392.t1 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder
Cre07.g324050 30775299, CUL1 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder
Cre12.g516500 30793341, CUL2 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder
Cre17.g734400 30781960, CUL3 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder
Cz01g09050.t1 No alias Cullin protein, neddylation domain; Cullin, N-terminal... 0.02 OrthoFinder
Cz02g12230.t1 No alias Cullin, N-terminal [Interproscan]. 0.02 OrthoFinder
Cz09g29020.t1 No alias Cullin protein, neddylation domain; Cullin, N-terminal... 0.02 OrthoFinder
Dusal.0203s00008.1 33199265 Cullin protein, neddylation domain; Cullin, N-terminal... 0.04 OrthoFinder
Dusal.1960s00001.1 33187634 Cullin, N-terminal [Interproscan]. 0.04 OrthoFinder
EOD28143 No alias Cullin, N-terminal; Cullin protein, neddylation domain... 0.02 OrthoFinder
EOD28450 No alias Cullin, N-terminal; Cullin protein, neddylation domain... 0.06 OrthoFinder
OT_03G02820.1 No alias Cullin protein, neddylation domain; Cullin, N-terminal... 0.02 OrthoFinder
OT_07G00170.1 No alias Cullin protein, neddylation domain; Cullin, N-terminal... 0.03 OrthoFinder
PTI_04G04250.1 No alias Cullin protein, neddylation domain; Cullin, N-terminal... 0.02 OrthoFinder
Sro1486_g276660.1 Contig1746.g15552 Cullin-3 0.03 OrthoFinder
Transcript_contig_54372 54372 Cullin protein, neddylation domain; Cullin, N-terminal... 0.02 OrthoFinder
Transcript_contig_54536 54536 Cullin protein, neddylation domain; Cullin, N-terminal... 0.04 OrthoFinder
XM_003062494.1 MicpuC2_45869, 45869 Cullin protein, neddylation domain; Cullin, N-terminal... 0.06 OrthoFinder
lcl|BLLF01001017.1_cds_GFH16576.1_11053 HaLaN_13019, GFH16576 CULLIN_2 domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000021.1_cds_PRW20903.1_5012 PRW20903 Cullin-1 0.03 OrthoFinder
lcl|LHPG02000023.1_cds_PRW20452.1_5392 PRW20452 Cullin family 0.02 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494050.1_3914 KAA8494050 Cullin-4 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
MF GO:0031625 ubiquitin protein ligase binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005856 cytoskeleton IEP Enrichment
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Enrichment
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0009112 nucleobase metabolic process IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0031491 nucleosome binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0043044 ATP-dependent chromatin remodeling IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0046112 nucleobase biosynthetic process IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
MF GO:0061630 ubiquitin protein ligase activity IEP Enrichment
MF GO:0061659 ubiquitin-like protein ligase activity IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001373 Cullin_N 17 649
IPR019559 Cullin_neddylation_domain 676 738
No external refs found!