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  5. XM_002501467.1

XM_002501467.1 (MICPUN_58144, 58144)


Aliases : MICPUN_58144, 58144

Description : GTPase


Gene families : OG_01_0000812 (OrthoFinder) Phylogenetic Tree(s): OG0000812_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002501467.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00022080.6 tig00022080_g23790.t1 NO-associated protein 1, chloroplastic/mitochondrial... 0.02 OrthoFinder
Cre07.g315400 30774434 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.1 OrthoFinder
Cre09.g400550 30781173, NOA1 NO-associated protein 1, chloroplastic/mitochondrial... 0.1 OrthoFinder
Cz13g06280.t1 No alias GTP binding domain [Interproscan]. 0.02 OrthoFinder
EOD41710 No alias Hypothetical protein [Ensembl]. 0.02 OrthoFinder
OT_04G02650.1 No alias GTP binding domain [Interproscan]. 0.03 OrthoFinder
OT_06G03500.1 No alias GTP binding domain [Interproscan]. 0.05 OrthoFinder
Sro453_g146070.1 Contig1693.g15164 Nitric oxide 0.05 OrthoFinder
TP03G05240.1 No alias Hypothetical protein 0.06 OrthoFinder
Vocar.0008s0291.1 32897303 GTP binding domain [Interproscan]. 0.02 OrthoFinder
XM_003062118.1 MicpuC2_28932, 28932 GTP binding domain [Interproscan]. 0.09 OrthoFinder
lcl|BLLF01001043.1_cds_GFH16733.1_11210 HaLaN_13216, GFH16733 G domain-containing protein 0.03 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32832.1_3690 PRW32832 IMP dehydrogenase GMP reductase 0.09 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498098.1_7051 KAA8498098 Protein YqeH 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499207.1_8160 KAA8499207 Protein YqeH 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006570 tyrosine metabolic process IEP Enrichment
BP GO:0006571 tyrosine biosynthetic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0030688 preribosome, small subunit precursor IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR006073 GTP-bd 263 331
No external refs found!