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  5. XM_002501306.1

XM_002501306.1 (MICPUN_57801, 57801)


Aliases : MICPUN_57801, 57801

Description : Set domain protein


Gene families : OG_01_0000051 (OrthoFinder) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002501306.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Cz02g12250.t1 No alias SET domain; PHD-like zinc-binding domain; SAND domain... 0.02 OrthoFinder
Cz03g35050.t1 No alias Pre-SET CXC domain; SET domain [Interproscan]. 0.02 OrthoFinder
Cz04g17250.t1 No alias AWS domain; SET domain; Zinc finger, CW-type [Interproscan]. 0.01 OrthoFinder
Dusal.0308s00004.1 33194636 PHD-zinc-finger like domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_78818 78818 PHD-finger; SAND domain; PHD-zinc-finger like domain... 0.01 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495860.1_1858 KAA8495860 Histone-lysine N-methyltransferase, H3 lysine-4 specific 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011124 Znf_CW 1017 1063
IPR000770 SAND_dom 592 660
IPR000770 SAND_dom 1318 1385
IPR000313 PWWP_dom 68 170
IPR001214 SET_dom 2039 2143
IPR009071 HMG_box_dom 407 475
No external refs found!