Aliases : MICPUN_67228, 67228
Description : Helicase, C-terminal; DEAD/DEAH box helicase domain [Interproscan].
Gene families : OG_01_0003345 (OrthoFinder) Phylogenetic Tree(s): OG0003345_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: XM_002501219.1 | |
Cluster | HCCA: Cluster_7 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00001071.15 | tig00001071_g6806.t1 | RNA biosynthesis.rRNA biogenesis.RH57 RNA helicase | 0.06 | OrthoFinder | |
Cre05.g238900 | 30783389 | RNA biosynthesis.rRNA biogenesis.RH57 RNA helicase | 0.09 | OrthoFinder | |
Cz06g09140.t1 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.02 | OrthoFinder | |
Dusal.0269s00014.1 | 33186351 | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.02 | OrthoFinder | |
EOD11447 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.02 | OrthoFinder | |
EOD38134 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.03 | OrthoFinder | |
OT_03G02370.1 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.17 | OrthoFinder | |
PTI_02G03460.1 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.12 | OrthoFinder | |
Sro1828_g300190.1 | Contig4573.g34140 | Probable ATP-dependent RNA helicase DDX52 | 0.13 | OrthoFinder | |
Vocar.0003s0482.1 | 32888943 | DEAD/DEAH box helicase domain; Helicase, C-terminal... | 0.05 | OrthoFinder | |
XM_003062302.1 | MicpuC2_35851, 35851 | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.15 | OrthoFinder | |
lcl|LHPG02000004.1_cds_PRW58819.1_7193 | PRW58819 | DEAD-box ATP-dependent RNA helicase 57 | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001510 | RNA methylation | IEP | Enrichment |
MF | GO:0004386 | helicase activity | IEP | Enrichment |
MF | GO:0004665 | prephenate dehydrogenase (NADP+) activity | IEP | Enrichment |
MF | GO:0005525 | GTP binding | IEP | Enrichment |
CC | GO:0005634 | nucleus | IEP | Enrichment |
CC | GO:0005730 | nucleolus | IEP | Enrichment |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
BP | GO:0006364 | rRNA processing | IEP | Enrichment |
BP | GO:0006396 | RNA processing | IEP | Enrichment |
BP | GO:0006570 | tyrosine metabolic process | IEP | Enrichment |
BP | GO:0006571 | tyrosine biosynthetic process | IEP | Enrichment |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
BP | GO:0008033 | tRNA processing | IEP | Enrichment |
MF | GO:0008094 | ATPase, acting on DNA | IEP | Enrichment |
MF | GO:0008134 | transcription factor binding | IEP | Enrichment |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Enrichment |
MF | GO:0008977 | prephenate dehydrogenase (NAD+) activity | IEP | Enrichment |
BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Enrichment |
BP | GO:0009095 | aromatic amino acid family biosynthetic process, prephenate pathway | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Enrichment |
MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Enrichment |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Enrichment |
BP | GO:0030488 | tRNA methylation | IEP | Enrichment |
CC | GO:0030684 | preribosome | IEP | Enrichment |
CC | GO:0030688 | preribosome, small subunit precursor | IEP | Enrichment |
CC | GO:0031515 | tRNA (m1A) methyltransferase complex | IEP | Enrichment |
CC | GO:0032040 | small-subunit processome | IEP | Enrichment |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Enrichment |
BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
CC | GO:0034708 | methyltransferase complex | IEP | Enrichment |
CC | GO:0043226 | organelle | IEP | Enrichment |
CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
CC | GO:0043527 | tRNA methyltransferase complex | IEP | Enrichment |
BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Enrichment |
No external refs found! |