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Aliases : MICPUN_57312, 57312
Description : tRNA-splicing endonuclease, subunit Sen54, N-terminal [Interproscan].
Gene families : OG_01_0005261 (OrthoFinder) Phylogenetic Tree(s): OG0005261_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: XM_002501074.1 | |
| Cluster | HCCA: Cluster_29 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| OT_18G00470.1 | No alias | tRNA-splicing endonuclease, subunit Sen54, N-terminal... | 0.02 | OrthoFinder | |
| lcl|BLLF01005002.1_cds_GFH30584.1_25061 | HaLaN_29466, GFH30584 | TRNA_int_end_N2 domain-containing protein | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003864 | 3-methyl-2-oxobutanoate hydroxymethyltransferase activity | IEP | Enrichment |
| MF | GO:0004126 | cytidine deaminase activity | IEP | Enrichment |
| MF | GO:0004489 | methylenetetrahydrofolate reductase (NAD(P)H) activity | IEP | Enrichment |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Enrichment |
| BP | GO:0006213 | pyrimidine nucleoside metabolic process | IEP | Enrichment |
| BP | GO:0006216 | cytidine catabolic process | IEP | Enrichment |
| BP | GO:0006555 | methionine metabolic process | IEP | Enrichment |
| BP | GO:0006801 | superoxide metabolic process | IEP | Enrichment |
| BP | GO:0006812 | cation transport | IEP | Enrichment |
| BP | GO:0009119 | ribonucleoside metabolic process | IEP | Enrichment |
| BP | GO:0009164 | nucleoside catabolic process | IEP | Enrichment |
| BP | GO:0009972 | cytidine deamination | IEP | Enrichment |
| BP | GO:0015939 | pantothenate metabolic process | IEP | Enrichment |
| BP | GO:0015940 | pantothenate biosynthetic process | IEP | Enrichment |
| BP | GO:0016567 | protein ubiquitination | IEP | Enrichment |
| MF | GO:0016730 | oxidoreductase activity, acting on iron-sulfur proteins as donors | IEP | Enrichment |
| MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Enrichment |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Enrichment |
| BP | GO:0030001 | metal ion transport | IEP | Enrichment |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | Enrichment |
| BP | GO:0034656 | nucleobase-containing small molecule catabolic process | IEP | Enrichment |
| BP | GO:0042454 | ribonucleoside catabolic process | IEP | Enrichment |
| BP | GO:0046087 | cytidine metabolic process | IEP | Enrichment |
| BP | GO:0046131 | pyrimidine ribonucleoside metabolic process | IEP | Enrichment |
| BP | GO:0046133 | pyrimidine ribonucleoside catabolic process | IEP | Enrichment |
| BP | GO:0046135 | pyrimidine nucleoside catabolic process | IEP | Enrichment |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0072529 | pyrimidine-containing compound catabolic process | IEP | Enrichment |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Enrichment |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Enrichment |
| BP | GO:1901658 | glycosyl compound catabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR024336 | tRNA_splic_suSen54_N | 99 | 168 |
| No external refs found! |