XM_002501074.1 (MICPUN_57312, 57312)


Aliases : MICPUN_57312, 57312

Description : tRNA-splicing endonuclease, subunit Sen54, N-terminal [Interproscan].


Gene families : OG_01_0005261 (OrthoFinder) Phylogenetic Tree(s): OG0005261_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002501074.1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
OT_18G00470.1 No alias tRNA-splicing endonuclease, subunit Sen54, N-terminal... 0.02 OrthoFinder
lcl|BLLF01005002.1_cds_GFH30584.1_25061 HaLaN_29466, GFH30584 TRNA_int_end_N2 domain-containing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP Enrichment
MF GO:0004126 cytidine deaminase activity IEP Enrichment
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Enrichment
BP GO:0006216 cytidine catabolic process IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0009119 ribonucleoside metabolic process IEP Enrichment
BP GO:0009164 nucleoside catabolic process IEP Enrichment
BP GO:0009972 cytidine deamination IEP Enrichment
BP GO:0015939 pantothenate metabolic process IEP Enrichment
BP GO:0015940 pantothenate biosynthetic process IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Enrichment
BP GO:0042454 ribonucleoside catabolic process IEP Enrichment
BP GO:0046087 cytidine metabolic process IEP Enrichment
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Enrichment
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Enrichment
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
BP GO:1901136 carbohydrate derivative catabolic process IEP Enrichment
BP GO:1901658 glycosyl compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR024336 tRNA_splic_suSen54_N 99 168
No external refs found!