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  5. XM_002500999.1

XM_002500999.1 (MICPUN_66033, 66033)


Aliases : MICPUN_66033, 66033

Description : Pseudouridine synthase, TruD [Interproscan].


Gene families : OG_01_0001257 (OrthoFinder) Phylogenetic Tree(s): OG0001257_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002500999.1
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Cz10g14090.t1 No alias Pseudouridine synthase, TruD [Interproscan]. 0.02 OrthoFinder
EOD17688 No alias Pseudouridine synthase, TruD [Interproscan]. 0.03 OrthoFinder
OT_09G01180.1 No alias Pseudouridine synthase, TruD [Interproscan]. 0.05 OrthoFinder
PTI_06G03030.1 No alias Pseudouridine synthase, TruD [Interproscan]. 0.03 OrthoFinder
Sro600_g173370.1 Contig1881.g16396 Multisubstrate pseudouridine synthase 7 0.03 OrthoFinder
lcl|BLLF01000024.1_cds_GFH06137.1_614 HaLaN_00716, GFH06137 TRNA pseudouridine synthase D 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0009451 RNA modification IEA Interproscan
MF GO:0009982 pseudouridine synthase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006535 cysteine biosynthetic process from serine IEP Enrichment
BP GO:0006563 L-serine metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP Enrichment
MF GO:0009001 serine O-acetyltransferase activity IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009070 serine family amino acid biosynthetic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016412 serine O-acyltransferase activity IEP Enrichment
MF GO:0016413 O-acetyltransferase activity IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019344 cysteine biosynthetic process IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
CC GO:0034457 Mpp10 complex IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR001656 PsdUridine_synth_TruD 270 681
No external refs found!