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Aliases : MICPUN_106801, 106801
Description : Ribosomal protein L30, ferredoxin-like fold domain; Ribosomal protein L30, N-terminal [Interproscan].
Gene families : OG_01_0002109 (OrthoFinder) Phylogenetic Tree(s): OG0002109_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: XM_002500889.1 | |
| Cluster | HCCA: Cluster_36 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00020909.42 | tig00020909_g15363.t1 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.24 | OrthoFinder | |
| Cre12.g537800 | 30791776, RPL7 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.26 | OrthoFinder | |
| Cz10g26010.t1 | No alias | Hypothetical protein | 0.1 | OrthoFinder | |
| Dusal.1371s00001.1 | 33191881 | Ribosomal protein L30, ferredoxin-like fold domain;... | 0.18 | OrthoFinder | |
| EOD11472 | No alias | Ribosomal protein L30, N-terminal; Ribosomal protein... | 0.14 | OrthoFinder | |
| EOD41169 | No alias | Ribosomal protein L30, N-terminal; Ribosomal protein... | 0.14 | OrthoFinder | |
| OT_03G01610.1 | No alias | Ribosomal protein L30, N-terminal; Ribosomal protein... | 0.13 | OrthoFinder | |
| PTI_19G01830.1 | No alias | Ribosomal protein L30, ferredoxin-like fold domain;... | 0.25 | OrthoFinder | |
| Sro264_g102550.1 | Contig921.g9681 | 60S ribosomal protein L7 | 0.29 | OrthoFinder | |
| SymbC1.scaffold4779.1 | 4779.1 | Ribosomal protein L30, ferredoxin-like fold domain;... | 0.01 | OrthoFinder | |
| SymbC1.scaffold680.2 | 680.2 | Ribosomal protein L30, ferredoxin-like fold domain;... | 0.09 | OrthoFinder | |
| TP02G06700.1 | No alias | Ribosomal protein L30, ferredoxin-like fold domain;... | 0.18 | OrthoFinder | |
| Vocar.0034s0005.1 | 32893109 | Ribosomal protein L30, N-terminal; Ribosomal protein... | 0.08 | OrthoFinder | |
| XM_003056432.1 | MicpuC2_31664, 31664 | Ribosomal protein L30, ferredoxin-like fold domain;... | 0.02 | OrthoFinder | |
| lcl|BLLF01000405.1_cds_GFH11454.1_5931 | HaLaN_06953, GFH11454 | Ribosomal protein L30, N-terminal [Interproscan]. | 0.05 | OrthoFinder | |
| lcl|BLLF01000775.1_cds_GFH14862.1_9339 | HaLaN_10989, GFH14862 | Ribosomal protein L30, ferredoxin-like fold domain;... | 0.06 | OrthoFinder | |
| lcl|LHPG02000024.1_cds_PRW20371.1_5557 | PRW20371 | 60S ribosomal L7-2 | 0.24 | OrthoFinder | |
| lcl|VRMN01000001.1_cds_KAA8499623.1_8576 | KAA8499623 | 60S ribosomal protein L7-4 | 0.13 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Enrichment |
| MF | GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity | IEP | Enrichment |
| MF | GO:0004325 | ferrochelatase activity | IEP | Enrichment |
| MF | GO:0004619 | phosphoglycerate mutase activity | IEP | Enrichment |
| MF | GO:0005198 | structural molecule activity | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005840 | ribosome | IEP | Enrichment |
| BP | GO:0006007 | glucose catabolic process | IEP | Enrichment |
| BP | GO:0006412 | translation | IEP | Enrichment |
| BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
| BP | GO:0006528 | asparagine metabolic process | IEP | Enrichment |
| BP | GO:0006529 | asparagine biosynthetic process | IEP | Enrichment |
| BP | GO:0006536 | glutamate metabolic process | IEP | Enrichment |
| BP | GO:0006537 | glutamate biosynthetic process | IEP | Enrichment |
| BP | GO:0006783 | heme biosynthetic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| MF | GO:0008097 | 5S rRNA binding | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Enrichment |
| BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| MF | GO:0015930 | glutamate synthase activity | IEP | Enrichment |
| CC | GO:0015934 | large ribosomal subunit | IEP | Enrichment |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Enrichment |
| MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | Enrichment |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Enrichment |
| BP | GO:0019320 | hexose catabolic process | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| MF | GO:0019843 | rRNA binding | IEP | Enrichment |
| MF | GO:0030145 | manganese ion binding | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0042168 | heme metabolic process | IEP | Enrichment |
| BP | GO:0042440 | pigment metabolic process | IEP | Enrichment |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
| BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
| BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | Enrichment |
| BP | GO:0043650 | dicarboxylic acid biosynthetic process | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| CC | GO:0044391 | ribosomal subunit | IEP | Enrichment |
| BP | GO:0046148 | pigment biosynthetic process | IEP | Enrichment |
| BP | GO:0046365 | monosaccharide catabolic process | IEP | Enrichment |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Enrichment |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Enrichment |
| No external refs found! |