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  5. XM_002500833.1

XM_002500833.1 (MICPUN_93665, 93665)


Aliases : MICPUN_93665, 93665

Description : Proliferating cell nuclear antigen, PCNA, N-terminal; Proliferating cell nuclear antigen, PCNA, C-terminal [Interproscan].


Gene families : OG_01_0001486 (OrthoFinder) Phylogenetic Tree(s): OG0001486_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002500833.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020553.141 tig00020553_g10631.t1 Cell cycle.interphase.DNA... 0.07 OrthoFinder
Cpa|evm.model.tig00021319.67 tig00021319_g20259.t1 Cell cycle.interphase.DNA... 0.07 OrthoFinder
Cre12.g515850 30793407, PCN1 Cell cycle.interphase.DNA... 0.04 OrthoFinder
Cz03g35210.t1 No alias Proliferating cell nuclear antigen, PCNA, C-terminal;... 0.05 OrthoFinder
Dusal.0073s00022.1 33194576 Proliferating cell nuclear antigen, PCNA, C-terminal;... 0.04 OrthoFinder
EOD29149 No alias Proliferating cell nuclear antigen, PCNA, C-terminal;... 0.07 OrthoFinder
OT_06G02920.1 No alias Proliferating cell nuclear antigen, PCNA, C-terminal;... 0.17 OrthoFinder
PTI_15G02900.1 No alias Proliferating cell nuclear antigen, PCNA, C-terminal;... 0.04 OrthoFinder
Sro57_g033090.1 Contig284.g3677 Proliferating cell nuclear antigen 0.04 OrthoFinder
Transcript_contig_58808 58808 Proliferating cell nuclear antigen, PCNA, C-terminal;... 0.02 OrthoFinder
Vocar.0006s0320.1 32894384 Proliferating cell nuclear antigen, PCNA, N-terminal;... 0.03 OrthoFinder
Vocar.0006s0321.1 32893962 Proliferating cell nuclear antigen, PCNA, N-terminal;... 0.02 OrthoFinder
XM_003059418.1 MicpuC2_33859, 33859 Proliferating cell nuclear antigen, PCNA, C-terminal;... 0.14 OrthoFinder
lcl|BLLF01002000.1_cds_GFH22252.1_16729 HaLaN_19687, GFH22252 Proliferating cell nuclear antigen 0.02 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45431.1_1402 PRW45431 Proliferating cell nuclear antigen 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499918.1_8871 KAA8499918 Proliferating cell nuclear antigen 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006275 regulation of DNA replication IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000226 microtubule cytoskeleton organization IEP Enrichment
CC GO:0000776 kinetochore IEP Enrichment
MF GO:0003689 DNA clamp loader activity IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004146 dihydrofolate reductase activity IEP Enrichment
MF GO:0004556 alpha-amylase activity IEP Enrichment
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005663 DNA replication factor C complex IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
CC GO:0005815 microtubule organizing center IEP Enrichment
BP GO:0006177 GMP biosynthetic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007096 regulation of exit from mitosis IEP Enrichment
BP GO:0007346 regulation of mitotic cell cycle IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009123 nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
BP GO:0031503 protein-containing complex localization IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0033566 gamma-tubulin complex localization IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0034453 microtubule anchoring IEP Enrichment
BP GO:0034629 cellular protein-containing complex localization IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0046037 GMP metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046653 tetrahydrofolate metabolic process IEP Enrichment
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Enrichment
InterPro domains Description Start Stop
IPR022648 Pr_cel_nuc_antig_N 1 124
IPR022649 Pr_cel_nuc_antig_C 127 253
No external refs found!