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  5. XM_002500789.1

XM_002500789.1 (MICPUN_104768, 104768)


Aliases : MICPUN_104768, 104768

Description : Ribulose-phosphate 3-epimerase (RPE)


Gene families : OG_01_0000691 (OrthoFinder) Phylogenetic Tree(s): OG0000691_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002500789.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020564.39 tig00020564_g11439.t1 Ribulose-phosphate 3-epimerase, chloroplastic... 0.06 OrthoFinder
Cre12.g511900 30792739, RPE1 Photosynthesis.calvin cycle.phosphopentose epimerase 0.03 OrthoFinder
EOD06320 No alias Ribulose-5-phosphate 3-epimerase [Ensembl]. 0.02 OrthoFinder
EOD07690 No alias Ribulose-phosphate 3-epimerase-like [Interproscan]. 0.02 OrthoFinder
OT_06G01640.1 No alias Ribulose-phosphate 3-epimerase-like [Interproscan]. 0.08 OrthoFinder
PTI_01G00840.1 No alias Ribulose-phosphate 3-epimerase-like [Interproscan]. 0.06 OrthoFinder
Sro1081_g239100.1 Contig4556.g34028 Ribulose-phosphate 3-epimerase 0.04 OrthoFinder
TP03G08510.1 No alias Ribulose-phosphate 3-epimerase-like [Interproscan]. 0.06 OrthoFinder
Transcript_contig_55201 55201 Ribulose-phosphate 3-epimerase-like [Interproscan]. 0.04 OrthoFinder
Vocar.0016s0191.1 32897880 Ribulose-phosphate 3-epimerase-like [Interproscan]. 0.04 OrthoFinder
XM_003059373.1 MicpuC2_47473, 47473 Ribulose-phosphate 3-epimerase-like [Interproscan]. 0.11 OrthoFinder
lcl|BLLF01000166.1_cds_GFH08523.1_3000 HaLaN_03502, GFH08523 Ribulose-phosphate 3-epimerase 0.05 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56800.1_9618 PRW56800 Ribulose-phosphate 3-chloroplastic 0.04 OrthoFinder
lcl|VRMN01000015.1_cds_KAA8491266.1_5894 KAA8491266 Ribulose-phosphate 3-epimerase, chloroplastic 0.03 OrthoFinder
lcl|VRMN01000017.1_cds_KAA8490989.1_6192 KAA8490989 Ribulose-phosphate 3-epimerase, chloroplastic 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Enrichment
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006754 ATP biosynthetic process IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
CC GO:0009512 cytochrome b6f complex IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
MF GO:0015252 proton channel activity IEP Enrichment
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Enrichment
BP GO:0015986 ATP synthesis coupled proton transport IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
BP GO:0017004 cytochrome complex assembly IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
MF GO:0045158 electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity IEP Enrichment
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR000056 Ribul_P_3_epim-like 51 249
No external refs found!