XM_002500770.1 (MICPUN_56660, 56660)

Aliases : MICPUN_56660, 56660

Description : NOT2/NOT3/NOT5, C-terminal [Interproscan].

Gene families : OG_01_0003749 (OrthoFinder) Phylogenetic Tree(s): OG0003749_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: XM_002500770.1
Cluster	HCCA: Cluster_8

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00020554.138	tig00020554_g10917.t1	RNA processing.RNA decay.deadenylation-dependent...	0.01	OrthoFinder
Cre06.g309050	30778680, NOT2	RNA processing.RNA decay.deadenylation-dependent...	0.02	OrthoFinder
EOD04246	No alias	NOT2/NOT3/NOT5, C-terminal [Interproscan].	0.01	OrthoFinder
XM_003059352.1	MicpuC2_69393, 69393	NOT2/NOT3/NOT5, C-terminal [Interproscan].	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
CC	GO:0018995	host cellular component	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0004112	cyclic-nucleotide phosphodiesterase activity	IEP	Enrichment
MF	GO:0004114	3',5'-cyclic-nucleotide phosphodiesterase activity	IEP	Enrichment
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Enrichment
BP	GO:0006397	mRNA processing	IEP	Enrichment
BP	GO:0006606	protein import into nucleus	IEP	Enrichment
BP	GO:0006913	nucleocytoplasmic transport	IEP	Enrichment
BP	GO:0016071	mRNA metabolic process	IEP	Enrichment
BP	GO:0016197	endosomal transport	IEP	Enrichment
BP	GO:0016482	cytosolic transport	IEP	Enrichment
CC	GO:0016592	mediator complex	IEP	Enrichment
BP	GO:0017038	protein import	IEP	Enrichment
BP	GO:0034504	protein localization to nucleus	IEP	Enrichment
BP	GO:0042147	retrograde transport, endosome to Golgi	IEP	Enrichment
BP	GO:0051169	nuclear transport	IEP	Enrichment
BP	GO:0051170	import into nucleus	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR007282	NOT2/3/5_C	386	507

External Links

No external refs found!

XM_002500770.1 (MICPUN_56660, 56660)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation