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Aliases : MICPUN_90184, 90184
Description : Prasinophyte specific chlorophyll a/b-binding protein, chloroplast precursor (LHCP3)
Gene families : OG_01_0000013 (OrthoFinder) Phylogenetic Tree(s): OG0000013_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: XM_002500767.1 | |
| Cluster | HCCA: Cluster_32 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre01.g066917 | 30788321, LHCBM1 | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder | |
| Cre03.g156900 | 30787808, LHCBM5 | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder | |
| Cre04.g232104 | 30791553, LHCBM3 | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder | |
| Cre06.g272650 | 30779881, LHCA8 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.02 | OrthoFinder | |
| Cre06.g278213 | 30779171, LHCA6 | Chlorophyll a-b binding protein P4, chloroplastic... | 0.02 | OrthoFinder | |
| Cre06.g283050 | 30779127, LHCA1 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.03 | OrthoFinder | |
| Cre06.g283950 | 30779716, LHCBM4 | Photosynthesis.photophosphorylation.photosystem... | 0.04 | OrthoFinder | |
| Cre06.g284250 | 30779962, LHCBM8 | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder | |
| Cre06.g285250 | 30779463, LHCBM6 | Photosynthesis.photophosphorylation.photosystem... | 0.04 | OrthoFinder | |
| Cre07.g344950 | 30774737, LHCA9 | Photosystem I chlorophyll a/b-binding protein 5,... | 0.02 | OrthoFinder | |
| Cre10.g425900 | 30790196, LHCA5 | Chlorophyll a-b binding protein 4, chloroplastic... | 0.02 | OrthoFinder | |
| Cre10.g452050 | 30790835, LHCA4 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.02 | OrthoFinder | |
| Cre11.g467573 | 30776039, LHCA3 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.02 | OrthoFinder | |
| Cre12.g508750 | 30791684, LHCA2 | Photosystem I chlorophyll a/b-binding protein 6,... | 0.02 | OrthoFinder | |
| Cre12.g548400 | 30793460, LHCBM2 | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder | |
| Cre12.g548950 | 30793494, LHCBM7 | Photosynthesis.photophosphorylation.photosystem... | 0.04 | OrthoFinder | |
| Cre16.g673650 | 30777655, LHCB5 | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder | |
| Cre16.g687900 | 30778224, LHCA7 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.04 | OrthoFinder | |
| Cre17.g720250 | 30782643, LHCB4 | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder | |
| Cz01g23030.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| Cz03g26240.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Cz04g09210.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Cz07g02100.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Cz08g11160.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Cz09g32070.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Cz10g10160.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| Cz12g16070.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Cz13g03240.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Cz15g09060.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Cz15g17110.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Cz16g14150.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Dusal.0017s00032.1 | 33200485 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Dusal.0042s00004.1 | 33189888 | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| Dusal.0081s00007.1 | 33198263 | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| Dusal.0206s00001.1 | 33187265 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Dusal.3971s00001.1 | 33198839 | Chlorophyll A-B binding protein [Interproscan]. | 0.04 | OrthoFinder | |
| OT_16G02540.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| Transcript_contig_58645 | 58645 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Transcript_contig_59040 | 59040 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Transcript_contig_79793 | 79793 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| UNPLg00080.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| Vocar.0001s1616.1 | 32885577 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Vocar.0014s0016.1 | 32888452 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| XM_003057773.1 | MicpuC2_45464, 45464 | Prasinophyte specific chlorophyll a/b-binding protein,... | 0.02 | OrthoFinder | |
| XM_003058148.1 | MicpuC2_70880, 70880 | Prasinophyte specific chlorophyll a/b-binding protein,... | 0.02 | OrthoFinder | |
| XM_003059477.1 | MicpuC2_49623, 49623 | Chlorophyll a/b-binding protein, psi-associated,... | 0.03 | OrthoFinder | |
| XM_003061061.1 | MicpuC2_70879, 70879 | Prasinophyte specific chlorophyll a/b-binding protein,... | 0.02 | OrthoFinder | |
| lcl|LHPG02000001.1_cds_PRW61161.1_400 | PRW61161 | Chlorophyll a b binding CP29 | 0.03 | OrthoFinder | |
| lcl|LHPG02000001.1_cds_PRW61250.1_625 | PRW61250 | Light-harvesting of photosystem I | 0.02 | OrthoFinder | |
| lcl|LHPG02000004.1_cds_PRW59323.1_7029 | PRW59323 | Light-harvesting of photosystem I | 0.03 | OrthoFinder | |
| lcl|LHPG02000007.1_cds_PRW56910.1_9115 | PRW56910 | Light-harvesting of photosystem I | 0.03 | OrthoFinder | |
| lcl|LHPG02000007.1_cds_PRW57230.1_9116 | PRW57230 | Light-harvesting of photosystem I | 0.02 | OrthoFinder | |
| lcl|LHPG02000009.1_cds_PRW56118.1_10249 | PRW56118 | Light harvesting complex a | 0.03 | OrthoFinder | |
| lcl|LHPG02000011.1_cds_PRW45697.1_1257 | PRW45697 | Light-harvesting of photosystem I | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Enrichment |
| MF | GO:0004556 | alpha-amylase activity | IEP | Enrichment |
| BP | GO:0006497 | protein lipidation | IEP | Enrichment |
| BP | GO:0006505 | GPI anchor metabolic process | IEP | Enrichment |
| BP | GO:0006506 | GPI anchor biosynthetic process | IEP | Enrichment |
| BP | GO:0006643 | membrane lipid metabolic process | IEP | Enrichment |
| BP | GO:0006644 | phospholipid metabolic process | IEP | Enrichment |
| BP | GO:0006650 | glycerophospholipid metabolic process | IEP | Enrichment |
| BP | GO:0006661 | phosphatidylinositol biosynthetic process | IEP | Enrichment |
| BP | GO:0006664 | glycolipid metabolic process | IEP | Enrichment |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Enrichment |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0008610 | lipid biosynthetic process | IEP | Enrichment |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | Enrichment |
| BP | GO:0009247 | glycolipid biosynthetic process | IEP | Enrichment |
| CC | GO:0009521 | photosystem | IEP | Enrichment |
| CC | GO:0009522 | photosystem I | IEP | Enrichment |
| CC | GO:0009538 | photosystem I reaction center | IEP | Enrichment |
| BP | GO:0015979 | photosynthesis | IEP | Enrichment |
| MF | GO:0016160 | amylase activity | IEP | Enrichment |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | Enrichment |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Enrichment |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | Enrichment |
| BP | GO:0045017 | glycerolipid biosynthetic process | IEP | Enrichment |
| BP | GO:0046467 | membrane lipid biosynthetic process | IEP | Enrichment |
| BP | GO:0046474 | glycerophospholipid biosynthetic process | IEP | Enrichment |
| BP | GO:0046486 | glycerolipid metabolic process | IEP | Enrichment |
| BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | Enrichment |
| MF | GO:0051213 | dioxygenase activity | IEP | Enrichment |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | Enrichment |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | Enrichment |
| BP | GO:1903509 | liposaccharide metabolic process | IEP | Enrichment |
| No external refs found! |