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  5. XM_002500743.1

XM_002500743.1 (MICPUN_56609, 56609)


Aliases : MICPUN_56609, 56609

Description : WD40 repeat; Anaphase-promoting complex subunit 4, WD40 domain [Interproscan].


Gene families : OG_01_0002425 (OrthoFinder) Phylogenetic Tree(s): OG0002425_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002500743.1
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Cre03.g194400 30786777, EIF3I Protein biosynthesis.translation... 0.06 OrthoFinder
Cz07g33040.t1 No alias WD40 repeat [Interproscan]. 0.01 OrthoFinder
EOD09058 No alias WD40 repeat [Interproscan]. 0.01 OrthoFinder
OT_06G00520.1 No alias WD40 repeat [Interproscan]. 0.03 OrthoFinder
PTI_20G00260.1 No alias Anaphase-promoting complex subunit 4, WD40 domain; WD40... 0.01 OrthoFinder
Sro2407_g326580.1 Contig325.g4310 Factor 3 subunit I 0.08 OrthoFinder
TP01G05660.1 No alias WD40 repeat [Interproscan]. 0.02 OrthoFinder
XM_003059324.1 MicpuC2_17773, 17773 WD40 repeat [Interproscan]. 0.05 OrthoFinder
lcl|LHPG02000012.1_cds_PRW45076.1_1703 PRW45076 Eukaryotic translation initiation factor 3 subunit I 0.07 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498429.1_7382 KAA8498429 Eukaryotic translation initiation factor 3 subunit I 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 38 75
IPR001680 WD40_repeat 275 306
IPR024977 Apc4_WD40_dom 133 190
No external refs found!